myRT

myRT report for GCA_008932875.1_ASM893287v1

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Seq: WBXA01000002.1 Ochrobactrum anthropi strain CCUG 12415 OAN12415_2_563k_37, whole genome shotgun sequence (563556 bp)
Overview 1 RT 1: 58968-63649 bp Neighborhood of RT #1 [58968, 63649] PHA00653 PHA00652 RVT-DGRs PRK05643 Feature: gene Location: 58968-59900 bp Feature: domain Description: PHA00653 Location: 59064-59895 bp Feature: domain Description: PHA00653 Location: 59064-59895 bp Feature: gene Location: 59945-60322 bp Feature: domain Description: PHA00652 Location: 59978-60317 bp Feature: domain Description: PHA00652 Location: 59978-6031 7 bp Feature: gene Location: 60319-61662 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 60862-61456 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 60862-61 456 bp Feature: gene Location: 61659-62846 bp Feature: domain Description: PRK05643 Location: 61749-62781 bp Feature: domain Description: PRK05643 Location: 61 749-62781 bp Feature: gene Location: 62846-63649 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA00653 (mtd;major tropism determinant), PHA00652 (hypothetical protein), RVT-DGRs, PRK05643 (DNA polymerase III subunit beta; Validated)

Seq: WBXA01000049.1 Ochrobactrum anthropi strain CCUG 12415 OAN12415_51_1929_76, whole genome shotgun sequence (1929 bp)
Overview 1 RT 1: 110-1689 bp Neighborhood of RT #1 [110, 1862] RVT-GII GIIM Feature: gene Location: 110-634 bp Feature: gene Location: 429-1862 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 798-1416 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 798-1416 bp Feature: domain Description: GIIM Note: maturase Location: 1464-1689 bp Feature: domain Description: GIIM Note: maturase Location: 1464-1689 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: WBXA01000006.1 Ochrobactrum anthropi strain CCUG 12415 OAN12415_6_221k_37, whole genome shotgun sequence (221442 bp)
Overview 1 RT 1: 47115-50107 bp Neighborhood of RT #1 [47115, 50107] PHA02517 RVT-GII GIIM Feature: gene Location: 47115-47330 bp Feature: gene Location: 47644-48234 bp Feature: domain Description: PHA02517 Location: 47743-48211 bp Feature: domain Description: PHA02517 Location: 47743 -48211 bp Feature: gene Location: 48203-49732 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 48476-49211 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 48476-49211 bp Feature: domain Description: GIIM Note: maturase Location: 49283-49511 bp Feature: domain Description: GIIM Note: maturase Location: 49283 -49511 bp Feature: gene Location: 49752-49880 bp Feature: gene Location: 49901-50107 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)