myRT

myRT report for GCA_008933895.1_ASM893389v1

Download annotations/find similar RTs

Seq: WBUD01000151.1 Rhizobiaceae bacterium isolate SB7 contig_10375, whole genome shotgun sequence (3384 bp)
Overview 1 RT 1: 3-1479 bp Neighborhood of RT #1 [3, 2774] RVT-CRISPR-like Feature: gene Location: 3-2774 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 885-1479 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 885-1 479 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR

Seq: WBUD01000009.1 Rhizobiaceae bacterium isolate SB7 contig_137, whole genome shotgun sequence (111573 bp)
Overview 1 RT 1: 107758-110803 bp Neighborhood of RT #1 [107758, 110988] AAA_23 DUF3732 RVT-UG11 Feature: gene Location: 107758-108246 bp Feature: gene Location: 108243-110189 bp Feature: domain Description: AAA_23 Location: 108252-109380 bp Feature: domain Description: AAA_2 3 Location: 1082 52 -109380 bp Feature: domain Description: DUF3732 Location: 109608-110145 bp Feature: domain Description: DUF3732 Location: 109608-110145 bp Feature: gene Location: 110230-110988 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 110368-110803 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 110368-110803 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_23 (pfam13476), DUF3732 (pfam12532), RVT-UG11

Seq: WBUD01000155.1 Rhizobiaceae bacterium isolate SB7 contig_15378, whole genome shotgun sequence (2607 bp)
Overview 1 RT 1: 3-2396 bp Neighborhood of RT #1 [3, 2593] STKc_PknB_like RVT-GII GIIM Feature: gene Location: 3-539 bp Feature: domain Description: STKc_PknB_like Location: 63-507 bp Feature: domain Description: STKc_PknB_like Location: 63 -507 bp Feature: gene Location: 587-2593 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1460-2093 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1460-2093 bp Feature: domain Description: GIIM Note: maturase Location: 2183-2396 bp Feature: domain Description: GIIM Note: maturase Location: 2183 -23 96 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT STKc_PknB_like (cd14014), RVT-GII, GIIM (pfam08388)