myRT

myRT report for GCA_008981245.1_ASM898124v1

Download annotations/find similar RTs

Seq: BKGO01000082.1 Acinetobacter ursingii TUM15084 DNA, sequence082, whole genome shotgun sequence (11142 bp)
Overview 1 RT 1: 7188-10872 bp Neighborhood of RT #1 [7188, 11141] prfC COG3177 RVT-UG2 Feature: gene Location: 7188-8777 bp Feature: domain Description: prfC Location: 7203-8775 bp Feature: domain Description: prfC Location: 7203-8775 bp Feature: gene Location: 8960-9964 bp Feature: domain Description: COG3177 Location: 8966-9857 bp Feature: domain Description: COG31 77 Location: 8966-9857 bp Feature: gene Location: 10080-11141 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 10086-10872 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 1 0086-1 0872 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT prfC (TIGR00503), COG3177 (Fic family protein ), RVT-UG2

Seq: BKGO01000168.1 Acinetobacter ursingii TUM15084 DNA, sequence168, whole genome shotgun sequence (6088 bp)
Overview 1 RT 1: 356-3889 bp Neighborhood of RT #1 [356, 3909] RVT_N RVT-GII GIIM COG5377 Feature: gene Location: 356-1084 bp Feature: gene Location: 1275-2855 bp Feature: domain Description: RVT_N Location: 1332-1575 bp Feature: domain Description: RVT_N Location: 1332 -1575 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1620-2271 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 162 0-2 2 71 bp Feature: domain Description: GIIM Note: maturase Location: 2322-2556 bp Feature: domain Description: GIIM Note: maturase Location: 2 32 2 -2 556 bp Feature: gene Location: 3178-3399 bp Feature: gene Location: 3448-3909 bp Feature: domain Description: COG5377 Location: 3532-3889 bp Feature: domain Description: COG5377 Location: 3532 -3889 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), COG5377 (Phage-related protein, predicted endonuclease )

Seq: BKGO01000330.1 Acinetobacter ursingii TUM15084 DNA, sequence330, whole genome shotgun sequence (2246 bp)
Overview 1 RT 1: 1-613 bp Neighborhood of RT #1 [1, 2244] RVT-UG5 Feature: gene Location: 1-2244 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 124-613 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 124-613 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG5