myRT

myRT report for GCA_008994835.1_ASM899483v1

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Seq: BKOC01000002.1 Acinetobacter ursingii TUM15289 DNA, sequence02, whole genome shotgun sequence (383647 bp)
Overview 1 RT 1: 278991-283741 bp Neighborhood of RT #1 [278991, 284067] PRK09692 RVT-UG2 DUF4031 TS_Pyrimidine_HMase Feature: gene Location: 278991-279176 bp Feature: gene Location: 279326-280498 bp Feature: domain Description: PRK09692 Location: 279332-280484 bp Feature: domain Description: PRK09692 Location: 279332-280484 bp Feature: gene Location: 280686-282089 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 280923-281820 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 280923-281 820 bp Feature: gene Location: 282748-283056 bp Feature: domain Description: DUF4031 Location: 282757-282979 bp Feature: domain Description: DUF4031 Location: 282757-282979 bp Feature: gene Location: 283063-284067 bp Feature: domain Description: TS_Pyrimidine_HMase Location: 283102-283741 bp Feature: domain Description: TS_Pyrimidine_HMase Location: 2831 02-283741 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09692 (Integrase; provisional), RVT-UG2, DUF4031 (pfam13223), TS_Pyrimidine_HMase (cl19097)

Seq: BKOC01000004.1 Acinetobacter ursingii TUM15289 DNA, sequence04, whole genome shotgun sequence (268751 bp)
Overview 1 RT 1: 39247-44258 bp 2 RT 2: 52600-58484 bp Neighborhood of RT #1 [39247, 44896] COG5377 RVT_N RVT-GII GIIM KAP_NTPase Neighborhood of RT #2 [52600, 58486] T5orf172 RVT-UG2 COG3177 prfC Feature: gene Location: 39247-39708 bp Feature: domain Description: COG5377 Location: 39331-39688 bp Feature: domain Description: COG5377 Location: 39331-39688 bp Feature: gene Location: 39757-39978 bp Feature: gene Location: 40301-41881 bp Feature: domain Description: RVT_N Location: 40358-40601 bp Feature: domain Description: RVT_N Location: 40358-40601 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40646-41297 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40646-412 97 bp Feature: domain Description: GIIM Note: maturase Location: 41348-41582 bp Feature: domain Description: GIIM Note: maturase Location: 41348-41582 bp Feature: gene Location: 42072-42800 bp Feature: gene Location: 43103-44896 bp Feature: domain Description: KAP_NTPase Location: 43145-44258 bp Feature: domain Description: KAP_NTPase Location: 43145-442 58 bp Feature: gene Location: 52600-52887 bp Feature: gene Location: 52892-53806 bp Feature: domain Description: T5orf172 Location: 53417-53741 bp Feature: domain Description: T5orf172 Location: 53417-53741 bp Feature: gene Location: 54194-55594 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 54431-55325 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 54431-5532 5 bp Feature: gene Location: 55710-56714 bp Feature: domain Description: COG3177 Location: 55716-56607 bp Feature: domain Description: COG3177 Location: 55716-56607 bp Feature: gene Location: 56897-58486 bp Feature: domain Description: prfC Location: 56912-58484 bp Feature: domain Description: prfC Location: 56912 -58484 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG5377 (Phage-related protein, predicted endonuclease ), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), KAP_NTPase (pfam07693), T5orf172 (smart00974), RVT-UG2, COG3177 (Fic family protein ), prfC (TIGR00503)