myRT

myRT report for GCA_009013335.1_ASM901333v1

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Seq: BKWZ01000004.1 Acinetobacter ursingii TUM15523 DNA, sequence004, whole genome shotgun sequence (196867 bp)
Overview 1 RT 1: 2230-8114 bp Neighborhood of RT #1 [2230, 8116] T5orf172 RVT-UG2 COG3177 prfC Feature: gene Location: 2230-2517 bp Feature: gene Location: 2522-3436 bp Feature: domain Description: T5orf172 Location: 3047-3371 bp Feature: domain Description: T5orf1 72 Location: 3047-3371 bp Feature: gene Location: 3824-5224 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 4061-4955 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 4061 -4955 bp Feature: gene Location: 5340-6344 bp Feature: domain Description: COG3177 Location: 5346-6237 bp Feature: domain Description: COG31 77 Location: 5346-6237 bp Feature: gene Location: 6527-8116 bp Feature: domain Description: prfC Location: 6542-8114 bp Feature: domain Description: prfC Location: 6542-81 1 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT T5orf172 (smart00974), RVT-UG2, COG3177 (Fic family protein ), prfC (TIGR00503)

Seq: BKWZ01000040.1 Acinetobacter ursingii TUM15523 DNA, sequence040, whole genome shotgun sequence (20963 bp)
Overview 1 RT 1: 9577-14588 bp Neighborhood of RT #1 [9577, 15226] COG5377 RVT_N RVT-GII GIIM KAP_NTPase Feature: gene Location: 9577-10038 bp Feature: domain Description: COG5377 Location: 9661-10018 bp Feature: domain Description: COG5377 Location: 9661-10018 bp Feature: gene Location: 10087-10308 bp Feature: gene Location: 10631-12211 bp Feature: domain Description: RVT_N Location: 10688-10931 bp Feature: domain Description: RVT_N Location: 10688-10931 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10976-11627 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10976-1162 7 bp Feature: domain Description: GIIM Note: maturase Location: 11678-11912 bp Feature: domain Description: GIIM Note: maturase Location: 11678-11912 bp Feature: gene Location: 12402-13130 bp Feature: gene Location: 13433-15226 bp Feature: domain Description: KAP_NTPase Location: 13475-14588 bp Feature: domain Description: KAP_NTPase Location: 13475-14588 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG5377 (Phage-related protein, predicted endonuclease ), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), KAP_NTPase (pfam07693)