myRT

myRT report for GCA_009013515.1_ASM901351v1

Download annotations/find similar RTs

Seq: BKXI01000014.1 Acinetobacter radioresistens TUM15532 DNA, sequence014, whole genome shotgun sequence (65920 bp)
Overview 1 RT 1: 27910-31317 bp Neighborhood of RT #1 [27910, 31317] LGT_LGT_LGT_TIGR03299 YqaJ RVT-GII Feature: gene Location: 27910-28956 bp Feature: domain Description: LGT_LGT_LGT_TIGR03299 Location: 27928-28942 bp Feature: domain Description: LGT_LGT_LGT_TIGR03299 Location: 27928-28942 bp Feature: gene Location: 29111-29602 bp Feature: domain Description: YqaJ Location: 29225-29465 bp Feature: domain Description: YqaJ Location: 29225-29465 bp Feature: gene Location: 29635-30099 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29641-29989 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29641 -29989 bp Feature: gene Location: 30192-30413 bp Feature: gene Location: 30535-31317 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LGT_LGT_LGT_TIGR03299, YqaJ (pfam09588), RVT-GII

Seq: BKXI01000051.1 Acinetobacter radioresistens TUM15532 DNA, sequence051, whole genome shotgun sequence (11836 bp)
Overview 1 RT 1: 2-6047 bp Neighborhood of RT #1 [2, 6047] SR_Res_par RVT-Retrons PIN_RfVapC2-like Feature: gene Location: 2-154 bp Feature: domain Description: SR_Res_par Location: 14-155 bp Feature: domain Description: SR_Res_par Location: 14-155 bp Feature: gene Location: 443-1162 bp Feature: gene Location: 1166-2335 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1304-1862 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1304-1862 bp Feature: gene Location: 2700-3095 bp Feature: domain Description: PIN_RfVapC2-like Location: 2712-3090 bp Feature: domain Description: PIN_RfVapC2 -like Location: 2 712 -3090 bp Feature: gene Location: 3972-6047 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SR_Res_par (cd03767), RVT-Retrons, PIN_RfVapC2-like (cd18734)

Seq: BKXI01000071.1 Acinetobacter radioresistens TUM15532 DNA, sequence071, whole genome shotgun sequence (5008 bp)
Overview 1 RT 1: 374-5006 bp Neighborhood of RT #1 [374, 5005] Rep_3 DDE_Tnp_1_5 RVT-GII GIIM PHA02517 RVT-UNC Feature: gene Location: 374-1357 bp Feature: domain Description: Rep_3 Location: 419-1085 bp Feature: domain Description: Rep_3 Location: 419-1085 bp Feature: gene Location: 2147-2758 bp Feature: domain Description: DDE_Tnp_1_5 Location: 2213-2537 bp Feature: domain Description: DDE_Tnp_1_5 Location: 2213 -253 7 bp Feature: gene Location: 2739-3377 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2757-2991 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2757-2991 bp Feature: domain Description: GIIM Note: maturase Location: 3069-3300 bp Feature: domain Description: GIIM Note: maturase Location: 3 069-3 3 00 bp Feature: gene Location: 3468-3785 bp Feature: domain Description: PHA02517 Location: 3471-3714 bp Feature: domain Description: PHA02517 Location: 3 471-3 714 bp Feature: gene Location: 4150-4569 bp Feature: gene Location: 4730-5005 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 4943-5006 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 4943 -5006 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Rep_3 (pfam01051), DDE_Tnp_1_5 (pfam13737), RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), RVT-G2L/RVT-GII/RVT-CRISPR(RVT-UNC)

Seq: BKXI01000083.1 Acinetobacter radioresistens TUM15532 DNA, sequence083, whole genome shotgun sequence (1737 bp)
Overview 1 RT 1: 2-458 bp Neighborhood of RT #1 [2, 772] RVT-G2L Feature: gene Location: 2-772 bp Feature: RT Description: RVT-G2L Note: G2L RT Location: 5-458 bp Feature: RT Description: RVT-G2L Note: G2L RT Location: 5-4 58 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-G2L