myRT

myRT report for GCA_009013795.1_ASM901379v1

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Seq: BKXW01000018.1 Acinetobacter ursingii TUM15547 DNA, sequence018, whole genome shotgun sequence (69971 bp)
Overview 1 RT 1: 11486-17372 bp 2 RT 2: 25076-30705 bp Neighborhood of RT #1 [11486, 17372] prfC COG3177 RVT-UG2 T5orf172 Neighborhood of RT #2 [25076, 30725] KAP_NTPase RVT_N RVT-GII GIIM COG5377 Feature: gene Location: 11486-13075 bp Feature: domain Description: prfC Location: 11501-13073 bp Feature: domain Description: prfC Location: 1 1 501 -1 3073 bp Feature: gene Location: 13258-14262 bp Feature: domain Description: COG3177 Location: 13264-14155 bp Feature: domain Description: COG31 77 Location: 1 3264-1 41 55 bp Feature: gene Location: 14378-15778 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 14615-15509 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 1 461 5-1 5509 bp Feature: gene Location: 16166-17080 bp Feature: domain Description: T5orf172 Location: 16691-17015 bp Feature: domain Description: T5orf1 72 Location: 1 6691 -1 701 5 bp Feature: gene Location: 17085-17372 bp Feature: gene Location: 25076-26869 bp Feature: domain Description: KAP_NTPase Location: 25118-26231 bp Feature: domain Description: KAP_NTPase Location: 251 1 8-26231 bp Feature: gene Location: 27172-27900 bp Feature: gene Location: 28091-29671 bp Feature: domain Description: RVT_N Location: 28148-28391 bp Feature: domain Description: RVT_N Location: 281 48-28391 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28436-29087 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28436-29087 bp Feature: domain Description: GIIM Note: maturase Location: 29138-29372 bp Feature: domain Description: GIIM Note: maturase Location: 291 38-29372 bp Feature: gene Location: 29994-30215 bp Feature: gene Location: 30264-30725 bp Feature: domain Description: COG5377 Location: 30348-30705 bp Feature: domain Description: COG5377 Location: 30348-30705 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT prfC (TIGR00503), COG3177 (Fic family protein ), RVT-UG2, T5orf172 (smart00974), KAP_NTPase (pfam07693), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), COG5377 (Phage-related protein, predicted endonuclease )