myRT

myRT report for GCA_009019175.1_ASM901917v1

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Seq: WCWM01000168.1 Bacteroides uniformis strain BIOML-A86 scaffold168_size6838, whole genome shotgun sequence (6838 bp)
Overview 1 RT 1: 2998-5508 bp Neighborhood of RT #1 [2998, 5546] GDP_FS_SDR_e GDP_FS_SDR_e RVT-GII Gmd Feature: gene Location: 2998-3447 bp Feature: domain Description: GDP_FS_SDR_e Location: 3019-3421 bp Feature: domain Description: GDP_FS_SDR_e Location: 301 9-3421 bp Feature: gene Location: 3440-4213 bp Feature: domain Description: GDP_FS_SDR_e Location: 3443-4187 bp Feature: domain Description: GDP_FS_SDR_e Location: 3443-41 87 bp Feature: gene Location: 4801-4935 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4804-4915 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4804-491 5 bp Feature: gene Location: 4957-5280 bp Feature: gene Location: 5325-5546 bp Feature: domain Description: Gmd Location: 5349-5508 bp Feature: domain Description: Gmd Location: 5349-5508 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GDP_FS_SDR_e (cd05239), RVT-GII, Gmd (COG1089)

Seq: WCWM01000022.1 Bacteroides uniformis strain BIOML-A86 scaffold22_size16632, whole genome shotgun sequence (16632 bp)
Overview 1 RT 1: 5431-10535 bp Neighborhood of RT #1 [5431, 10535] Toprim_2 RVT-GII Intron_maturas2 Feature: gene Location: 5431-6834 bp Feature: gene Location: 7045-7974 bp Feature: domain Description: Toprim_2 Location: 7597-7885 bp Feature: domain Description: Toprim_2 Location: 7597-7885 bp Feature: gene Location: 7946-9754 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8210-9032 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 82 10-9032 bp Feature: domain Description: Intron_maturas2 Location: 9101-9410 bp Feature: domain Description: Intron_maturas2 Location: 9101-9410 bp Feature: gene Location: 10043-10186 bp Feature: gene Location: 10302-10535 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Toprim_2 (pfam13155), RVT-GII, Intron_maturas2 (pfam01348)

Seq: WCWM01000027.1 Bacteroides uniformis strain BIOML-A86 scaffold27_size18229, whole genome shotgun sequence (18229 bp)
Overview 1 RT 1: 8050-12242 bp Neighborhood of RT #1 [8050, 12242] RVT-GII Intron_maturas2 TraG-D_C Feature: gene Location: 8050-8220 bp Feature: gene Location: 8210-8470 bp Feature: gene Location: 8512-10374 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8836-9658 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 883 6-9658 bp Feature: domain Description: Intron_maturas2 Location: 9766-10036 bp Feature: domain Description: Intron_maturas2 Location: 9766-1003 6 bp Feature: gene Location: 10352-11533 bp Feature: domain Description: TraG-D_C Location: 10880-11213 bp Feature: domain Description: TraG-D_C Location: 10880-11213 bp Feature: gene Location: 11829-12242 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), TraG-D_C (pfam12696)

Seq: WCWM01000312.1 Bacteroides uniformis strain BIOML-A86 scaffold312_size4590, whole genome shotgun sequence (4590 bp)
Overview 1 RT 1: 3-4204 bp Neighborhood of RT #1 [3, 4587] RVT-GII RVT_N COG4646 Feature: gene Location: 3-191 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-192 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-192 bp Feature: gene Location: 203-610 bp Feature: domain Description: RVT_N Location: 326-569 bp Feature: domain Description: RVT_N Location: 326-569 bp Feature: gene Location: 1216-4587 bp Feature: domain Description: COG4646 Location: 2143-4204 bp Feature: domain Description: COG4 64 6 Location: 214 3-4 204 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, RVT_N (pfam13655), COG4646 (Adenine-specific DNA methylase, N12 class )

Seq: WCWM01000518.1 Bacteroides uniformis strain BIOML-A86 scaffold518_size2925, whole genome shotgun sequence (2925 bp)
Overview 1 RT 1: 1-2672 bp Neighborhood of RT #1 [1, 2672] RVT_N RVT-GII GIIM Feature: gene Location: 1-549 bp Feature: gene Location: 554-2206 bp Feature: domain Description: RVT_N Location: 608-851 bp Feature: domain Description: RVT_N Location: 608-85 1 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 896-1544 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 896-15 44 bp Feature: domain Description: GIIM Note: maturase Location: 1598-1829 bp Feature: domain Description: GIIM Note: maturase Location: 15 98-1829 bp Feature: gene Location: 2288-2461 bp Feature: gene Location: 2523-2672 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: WCWM01000614.1 Bacteroides uniformis strain BIOML-A86 scaffold614_size2370, whole genome shotgun sequence (2370 bp)
Overview 1 RT 1: 2-2369 bp Neighborhood of RT #1 [2, 2369] RVT_N RVT-GII YkfC Feature: gene Location: 2-1657 bp Feature: domain Description: RVT_N Location: 44-287 bp Feature: domain Description: RVT_N Location: 44-287 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 332-980 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 332-980 bp Feature: domain Description: YkfC Location: 1190-1280 bp Feature: domain Description: YkfC Location: 1190-1280 bp Feature: gene Location: 1611-2369 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, YkfC (COG3344)

Seq: WCWM01000731.1 Bacteroides uniformis strain BIOML-A86 scaffold731_size1843, whole genome shotgun sequence (1843 bp)
Overview 1 RT 1: 316-1841 bp Neighborhood of RT #1 [316, 1841] RVT-DGRs Feature: gene Location: 316-1617 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 529-1123 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 529-1123 bp Feature: gene Location: 1614-1841 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: WCWM01000088.1 Bacteroides uniformis strain BIOML-A86 scaffold88_size9202, whole genome shotgun sequence (9202 bp)
Overview 1 RT 1: 3730-8285 bp Neighborhood of RT #1 [3730, 8299] AbiEii AbiEi_3_N RVT-DGRs MutS_I HTH_18 Feature: gene Location: 3730-4743 bp Feature: domain Description: AbiEii Location: 3856-4690 bp Feature: domain Description: AbiEii Location: 38 56-4690 bp Feature: gene Location: 4740-5336 bp Feature: domain Description: AbiEi_3_N Location: 4815-5058 bp Feature: domain Description: AbiEi_3_N Location: 48 15-5058 bp Feature: gene Location: 5689-6963 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 5914-6604 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 5914-6604 bp Feature: gene Location: 6960-7418 bp Feature: domain Description: MutS_I Location: 7005-7200 bp Feature: domain Description: MutS_I Location: 7005-7200 bp Feature: gene Location: 7442-8299 bp Feature: domain Description: HTH_18 Location: 8051-8285 bp Feature: domain Description: HTH_18 Location: 8 051-8 28 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbiEii (pfam08843), AbiEi_3_N (pfam17194), RVT-DGRs, MutS_I (pfam01624), HTH_18 (pfam12833)

Seq: WCWM01000910.1 Bacteroides uniformis strain BIOML-A86 scaffold910_size1208, whole genome shotgun sequence (1208 bp)
Overview 1 RT 1: 132-1203 bp Neighborhood of RT #1 [132, 1205] RVT-GII Feature: gene Location: 132-359 bp Feature: gene Location: 531-1205 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 858-1203 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 858-1203 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII