myRT

myRT report for GCA_009019475.1_ASM901947v1

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Seq: WCVY01000010.1 Bacteroides uniformis strain BIOML-A71 scaffold10_size46776, whole genome shotgun sequence (46776 bp)
Overview 1 RT 1: 2344-7448 bp Neighborhood of RT #1 [2344, 7448] Toprim_2 RVT-GII Intron_maturas2 Feature: gene Location: 2344-3747 bp Feature: gene Location: 3958-4887 bp Feature: domain Description: Toprim_2 Location: 4510-4798 bp Feature: domain Description: Toprim_2 Location: 451 0-4798 bp Feature: gene Location: 4859-6667 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5123-5945 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51 23-5945 bp Feature: domain Description: Intron_maturas2 Location: 6014-6323 bp Feature: domain Description: Intron_maturas2 Location: 601 4-6323 bp Feature: gene Location: 6956-7099 bp Feature: gene Location: 7215-7448 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Toprim_2 (pfam13155), RVT-GII, Intron_maturas2 (pfam01348)

Seq: WCVY01000115.1 Bacteroides uniformis strain BIOML-A71 scaffold115_size14575, whole genome shotgun sequence (14575 bp)
Overview 1 RT 1: 4874-7712 bp Neighborhood of RT #1 [4874, 7712] RVT-DGRs Feature: gene Location: 4874-5116 bp Feature: gene Location: 5320-5769 bp Feature: gene Location: 5802-7103 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 6015-6609 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 6015-6609 bp Feature: gene Location: 7200-7457 bp Feature: gene Location: 7479-7712 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: WCVY01000186.1 Bacteroides uniformis strain BIOML-A71 scaffold186_size8996, whole genome shotgun sequence (8996 bp)
Overview 1 RT 1: 1501-5724 bp Neighborhood of RT #1 [1501, 5724] TraG-D_C RVT-GII Intron_maturas2 Feature: gene Location: 1501-1914 bp Feature: gene Location: 2210-3391 bp Feature: domain Description: TraG-D_C Location: 2738-3071 bp Feature: domain Description: TraG-D_C Location: 273 8-3 071 bp Feature: gene Location: 3369-5171 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3633-4455 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 63 3 -4455 bp Feature: domain Description: Intron_maturas2 Location: 4563-4833 bp Feature: domain Description: Intron_maturas2 Location: 4563 -483 3 bp Feature: gene Location: 5273-5533 bp Feature: gene Location: 5494-5724 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TraG-D_C (pfam12696), RVT-GII, Intron_maturas2 (pfam01348)

Seq: WCVY01000223.1 Bacteroides uniformis strain BIOML-A71 scaffold223_size6758, whole genome shotgun sequence (6758 bp)
Overview 1 RT 1: 2978-5491 bp Neighborhood of RT #1 [2978, 5529] GDP_FS_SDR_e GDP_FS_SDR_e RVT-GII Gmd Feature: gene Location: 2978-3427 bp Feature: domain Description: GDP_FS_SDR_e Location: 2999-3401 bp Feature: domain Description: GDP_FS_SDR_e Location: 2999-34 01 bp Feature: gene Location: 3420-4193 bp Feature: domain Description: GDP_FS_SDR_e Location: 3423-4167 bp Feature: domain Description: GDP_FS_SDR_e Location: 34 23-4 167 bp Feature: gene Location: 4784-4918 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4787-4898 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 787-4 898 bp Feature: gene Location: 4940-5263 bp Feature: gene Location: 5308-5529 bp Feature: domain Description: Gmd Location: 5332-5491 bp Feature: domain Description: Gmd Location: 5332-54 91 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GDP_FS_SDR_e (cd05239), RVT-GII, Gmd (COG1089)

Seq: WCVY01000337.1 Bacteroides uniformis strain BIOML-A71 scaffold337_size2872, whole genome shotgun sequence (2872 bp)
Overview 1 RT 1: 1-2871 bp Neighborhood of RT #1 [1, 2871] RVT_N RVT-GII GIIM Feature: gene Location: 1-1008 bp Feature: gene Location: 962-2629 bp Feature: domain Description: RVT_N Location: 1016-1259 bp Feature: domain Description: RVT_N Location: 1016-125 9 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1304-1952 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1304-195 2 bp Feature: domain Description: GIIM Note: maturase Location: 2006-2237 bp Feature: domain Description: GIIM Note: maturase Location: 2006-2237 bp Feature: gene Location: 2611-2871 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: WCVY01000359.1 Bacteroides uniformis strain BIOML-A71 scaffold359_size2562, whole genome shotgun sequence (2562 bp)
Overview 1 RT 1: 3-864 bp Neighborhood of RT #1 [3, 864] RVT_N RVT-GII Feature: gene Location: 3-398 bp Feature: domain Description: RVT_N Location: 57-300 bp Feature: domain Description: RVT_N Location: 57-300 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 345-399 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 345-399 bp Feature: gene Location: 505-669 bp Feature: gene Location: 715-864 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII

Seq: WCVY01000377.1 Bacteroides uniformis strain BIOML-A71 scaffold377_size2298, whole genome shotgun sequence (2298 bp)
Overview 1 RT 1: 2-1764 bp Neighborhood of RT #1 [2, 2141] RVT_N RVT-GII YkfC Feature: gene Location: 2-451 bp Feature: gene Location: 405-2141 bp Feature: domain Description: RVT_N Location: 528-771 bp Feature: domain Description: RVT_N Location: 528-7 7 1 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 816-1464 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 816-1464 bp Feature: domain Description: YkfC Location: 1674-1764 bp Feature: domain Description: YkfC Location: 167 4-17 64 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, YkfC (COG3344)

Seq: WCVY01000429.1 Bacteroides uniformis strain BIOML-A71 scaffold429_size1495, whole genome shotgun sequence (1495 bp)
Overview 1 RT 1: 1-1115 bp Neighborhood of RT #1 [1, 1492] RVT-GII GIIM Feature: gene Location: 1-210 bp Feature: gene Location: 215-1492 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 218-830 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 218 -8 30 bp Feature: domain Description: GIIM Note: maturase Location: 884-1115 bp Feature: domain Description: GIIM Note: maturase Location: 8 8 4-1115 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: WCVY01000092.1 Bacteroides uniformis strain BIOML-A71 scaffold92_size16969, whole genome shotgun sequence (16969 bp)
Overview 1 RT 1: 7216-11771 bp Neighborhood of RT #1 [7216, 11785] AbiEii AbiEi_3_N RVT-DGRs MutS_I HTH_18 Feature: gene Location: 7216-8229 bp Feature: domain Description: AbiEii Location: 7342-8176 bp Feature: domain Description: AbiEii Location: 7342-8176 bp Feature: gene Location: 8226-8822 bp Feature: domain Description: AbiEi_3_N Location: 8301-8544 bp Feature: domain Description: AbiEi_3_N Location: 8301-8544 bp Feature: gene Location: 9175-10449 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 9400-10090 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 9 400-1009 0 bp Feature: gene Location: 10446-10904 bp Feature: domain Description: MutS_I Location: 10491-10686 bp Feature: domain Description: MutS_I Location: 1049 1-10686 bp Feature: gene Location: 10928-11785 bp Feature: domain Description: HTH_18 Location: 11537-11771 bp Feature: domain Description: HTH_18 Location: 11537-11771 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbiEii (pfam08843), AbiEi_3_N (pfam17194), RVT-DGRs, MutS_I (pfam01624), HTH_18 (pfam12833)