myRT

myRT report for GCA_009019645.1_ASM901964v1

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Seq: WCVO01000133.1 Bacteroides uniformis strain BIOML-A61 scaffold133_size10666, whole genome shotgun sequence (10666 bp)
Overview 1 RT 1: 6241-10077 bp Neighborhood of RT #1 [6241, 10077] TraG-D_C RVT_N RVT-GII GIIM Feature: gene Location: 6241-6654 bp Feature: gene Location: 6749-7954 bp Feature: domain Description: TraG-D_C Location: 7331-7661 bp Feature: domain Description: TraG-D_C Location: 7331 -7661 bp Feature: gene Location: 7959-9611 bp Feature: domain Description: RVT_N Location: 8013-8256 bp Feature: domain Description: RVT_N Location: 801 3-8256 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8301-8949 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8301 -8949 bp Feature: domain Description: GIIM Note: maturase Location: 9003-9234 bp Feature: domain Description: GIIM Note: maturase Location: 9003-9234 bp Feature: gene Location: 9693-9866 bp Feature: gene Location: 9928-10077 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TraG-D_C (pfam12696), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: WCVO01000156.1 Bacteroides uniformis strain BIOML-A61 scaffold156_size6576, whole genome shotgun sequence (6576 bp)
Overview 1 RT 1: 2978-5491 bp Neighborhood of RT #1 [2978, 5529] GDP_FS_SDR_e GDP_FS_SDR_e RVT-GII Gmd Feature: gene Location: 2978-3427 bp Feature: domain Description: GDP_FS_SDR_e Location: 2999-3401 bp Feature: domain Description: GDP_FS_SDR_e Location: 2 999-3401 bp Feature: gene Location: 3420-4193 bp Feature: domain Description: GDP_FS_SDR_e Location: 3423-4167 bp Feature: domain Description: GDP_FS_SDR_e Location: 342 3-4167 bp Feature: gene Location: 4784-4918 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4787-4898 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4787-4898 bp Feature: gene Location: 4940-5263 bp Feature: gene Location: 5308-5529 bp Feature: domain Description: Gmd Location: 5332-5491 bp Feature: domain Description: Gmd Location: 5332 -5491 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GDP_FS_SDR_e (cd05239), RVT-GII, Gmd (COG1089)

Seq: WCVO01000019.1 Bacteroides uniformis strain BIOML-A61 scaffold19_size57803, whole genome shotgun sequence (57803 bp)
Overview 1 RT 1: 20339-25349 bp Neighborhood of RT #1 [20339, 25615] YWFCY RVT-GII Intron_maturas2 HNHc TraG-D_C DUF4326 Feature: gene Location: 20339-21349 bp Feature: domain Description: YWFCY Location: 20345-20522 bp Feature: domain Description: YWFCY Location: 203 45-20522 bp Feature: gene Location: 21377-21892 bp Feature: gene Location: 21894-23699 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22158-22980 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22158-22980 bp Feature: domain Description: Intron_maturas2 Location: 23058-23388 bp Feature: domain Description: Intron_maturas2 Location: 23 058-23 3 88 bp Feature: domain Description: HNHc Note: nucleases Location: 23532-23676 bp Feature: domain Description: HNHc Note: nucleases Location: 23 53 2-23 676 bp Feature: gene Location: 23686-24855 bp Feature: domain Description: TraG-D_C Location: 24211-24544 bp Feature: domain Description: TraG-D_C Location: 24211-24544 bp Feature: gene Location: 25073-25615 bp Feature: domain Description: DUF4326 Location: 25094-25349 bp Feature: domain Description: DUF43 26 Location: 25094-253 49 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YWFCY (pfam14293), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), TraG-D_C (pfam12696), DUF4326 (pfam14216)

Seq: WCVO01000220.1 Bacteroides uniformis strain BIOML-A61 scaffold220_size2466, whole genome shotgun sequence (2466 bp)
Overview 1 RT 1: 2-1818 bp Neighborhood of RT #1 [2, 2195] RVT_N RVT-GII YkfC Feature: gene Location: 2-505 bp Feature: gene Location: 459-2195 bp Feature: domain Description: RVT_N Location: 582-825 bp Feature: domain Description: RVT_N Location: 582-825 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 870-1518 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 870-1518 bp Feature: domain Description: YkfC Location: 1728-1818 bp Feature: domain Description: YkfC Location: 1728-1818 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, YkfC (COG3344)

Seq: WCVO01000235.1 Bacteroides uniformis strain BIOML-A61 scaffold235_size1768, whole genome shotgun sequence (1768 bp)
Overview 1 RT 1: 2-1374 bp Neighborhood of RT #1 [2, 1766] RVT-GII GIIM Feature: gene Location: 2-505 bp Feature: gene Location: 459-1766 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 465-1089 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 465 -1089 bp Feature: domain Description: GIIM Note: maturase Location: 1143-1374 bp Feature: domain Description: GIIM Note: maturase Location: 1143-1374 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: WCVO01000239.1 Bacteroides uniformis strain BIOML-A61 scaffold239_size1711, whole genome shotgun sequence (1711 bp)
Overview 1 RT 1: 131-938 bp Neighborhood of RT #1 [131, 1432] RVT-DGRs Feature: gene Location: 131-1432 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 344-938 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 344-938 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: WCVO01000049.1 Bacteroides uniformis strain BIOML-A61 scaffold49_size32933, whole genome shotgun sequence (32933 bp)
Overview 1 RT 1: 5191-9091 bp Neighborhood of RT #1 [5191, 10083] HTH_18 MutS_I RVT-DGRs Avd_like BF2867_like_N Feature: gene Location: 5191-6048 bp Feature: domain Description: HTH_18 Location: 5800-6034 bp Feature: domain Description: HTH_18 Location: 5800-6034 bp Feature: gene Location: 6072-6530 bp Feature: domain Description: MutS_I Location: 6117-6312 bp Feature: domain Description: MutS_I Location: 6117 -6312 bp Feature: gene Location: 6527-7909 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 6860-7550 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 6860-7 550 bp Feature: gene Location: 8086-8460 bp Feature: domain Description: Avd_like Location: 8113-8419 bp Feature: domain Description: Avd_like Location: 8113-8419 bp Feature: gene Location: 8530-10083 bp Feature: domain Description: BF2867_like_N Location: 8566-9091 bp Feature: domain Description: BF2867 _like_N Location: 8566-9091 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_18 (pfam12833), MutS_I (pfam01624), RVT-DGRs, Avd_like (cd16376), BF2867_like_N (cd13120)

Seq: WCVO01000058.1 Bacteroides uniformis strain BIOML-A61 scaffold58_size28691, whole genome shotgun sequence (28691 bp)
Overview 1 RT 1: 17136-21328 bp Neighborhood of RT #1 [17136, 21328] RVT-GII Intron_maturas2 TraG-D_C Feature: gene Location: 17136-17306 bp Feature: gene Location: 17296-17556 bp Feature: gene Location: 17598-19460 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17922-18744 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17922-18 744 bp Feature: domain Description: Intron_maturas2 Location: 18852-19122 bp Feature: domain Description: Intron_maturas2 Location: 18 8 52-19122 bp Feature: gene Location: 19438-20619 bp Feature: domain Description: TraG-D_C Location: 19966-20299 bp Feature: domain Description: TraG-D_C Location: 19966-20299 bp Feature: gene Location: 20915-21328 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), TraG-D_C (pfam12696)