myRT

myRT report for GCA_009019655.1_ASM901965v1

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Seq: WCVN01000131.1 Bacteroides uniformis strain BIOML-A60 scaffold131_size11793, whole genome shotgun sequence (11793 bp)
Overview 1 RT 1: 914-7246 bp Neighborhood of RT #1 [914, 7246] AAA_25 RVT-GII Intron_maturas2 Toprim_2 Feature: gene Location: 914-1981 bp Feature: domain Description: AAA_25 Location: 1049-1511 bp Feature: domain Description: AAA_25 Location: 1 049-1 51 1 bp Feature: gene Location: 2142-2375 bp Feature: gene Location: 2923-4731 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3187-4009 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 87-4009 bp Feature: domain Description: Intron_maturas2 Location: 4078-4387 bp Feature: domain Description: Intron_maturas2 Location: 4078-4387 bp Feature: gene Location: 4703-5632 bp Feature: domain Description: Toprim_2 Location: 5255-5543 bp Feature: domain Description: Toprim_2 Location: 5255-5543 bp Feature: gene Location: 5843-7246 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_25 (pfam13481), RVT-GII, Intron_maturas2 (pfam01348), Toprim_2 (pfam13155)

Seq: WCVN01000252.1 Bacteroides uniformis strain BIOML-A60 scaffold252_size6321, whole genome shotgun sequence (6321 bp)
Overview 1 RT 1: 2978-5491 bp Neighborhood of RT #1 [2978, 5529] GDP_FS_SDR_e GDP_FS_SDR_e RVT-GII Gmd Feature: gene Location: 2978-3427 bp Feature: domain Description: GDP_FS_SDR_e Location: 2999-3401 bp Feature: domain Description: GDP_FS_SDR_e Location: 2 999-3401 bp Feature: gene Location: 3420-4193 bp Feature: domain Description: GDP_FS_SDR_e Location: 3423-4167 bp Feature: domain Description: GDP_FS_SDR_e Location: 342 3-4167 bp Feature: gene Location: 4784-4918 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4787-4898 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4787-4898 bp Feature: gene Location: 4940-5263 bp Feature: gene Location: 5308-5529 bp Feature: domain Description: Gmd Location: 5332-5491 bp Feature: domain Description: Gmd Location: 5332 -5491 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GDP_FS_SDR_e (cd05239), RVT-GII, Gmd (COG1089)

Seq: WCVN01000315.1 Bacteroides uniformis strain BIOML-A60 scaffold315_size4515, whole genome shotgun sequence (4515 bp)
Overview 1 RT 1: 1-2735 bp Neighborhood of RT #1 [1, 2735] RVT_N RVT-GII GIIM Feature: gene Location: 1-612 bp Feature: gene Location: 617-2269 bp Feature: domain Description: RVT_N Location: 671-914 bp Feature: domain Description: RVT_N Location: 671-914 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 959-1607 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 959-1607 bp Feature: domain Description: GIIM Note: maturase Location: 1661-1892 bp Feature: domain Description: GIIM Note: maturase Location: 1661-1892 bp Feature: gene Location: 2351-2524 bp Feature: gene Location: 2586-2735 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: WCVN01000053.1 Bacteroides uniformis strain BIOML-A60 scaffold53_size20212, whole genome shotgun sequence (20212 bp)
Overview 1 RT 1: 4099-8615 bp Neighborhood of RT #1 [4099, 8668] HTH_18 MutS_I RVT-DGRs AbiEi_3_N AbiEii Feature: gene Location: 4099-4956 bp Feature: domain Description: HTH_18 Location: 4708-4942 bp Feature: domain Description: HTH_18 Location: 4 708-4 94 2 bp Feature: gene Location: 4980-5438 bp Feature: domain Description: MutS_I Location: 5025-5220 bp Feature: domain Description: MutS_I Location: 5025-5220 bp Feature: gene Location: 5435-6709 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 5660-6350 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 5660-6350 bp Feature: gene Location: 7062-7658 bp Feature: domain Description: AbiEi_3_N Location: 7137-7380 bp Feature: domain Description: AbiEi_3_N Location: 7137-7380 bp Feature: gene Location: 7655-8668 bp Feature: domain Description: AbiEii Location: 7781-8615 bp Feature: domain Description: AbiEii Location: 7781-8615 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_18 (pfam12833), MutS_I (pfam01624), RVT-DGRs, AbiEi_3_N (pfam17194), AbiEii (pfam08843)

Seq: WCVN01000545.1 Bacteroides uniformis strain BIOML-A60 scaffold545_size1531, whole genome shotgun sequence (1531 bp)
Overview 1 RT 1: 118-925 bp Neighborhood of RT #1 [118, 1419] RVT-DGRs Feature: gene Location: 118-1419 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 331-925 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 331-925 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: WCVN01000581.1 Bacteroides uniformis strain BIOML-A60 scaffold581_size1199, whole genome shotgun sequence (1199 bp)
Overview 1 RT 1: 1-1196 bp Neighborhood of RT #1 [1, 1196] RVT_N RVT-GII Feature: gene Location: 1-912 bp Feature: domain Description: RVT_N Location: 55-298 bp Feature: domain Description: RVT_N Location: 55-298 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 343-910 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 343-910 bp Feature: gene Location: 927-1196 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII

Seq: WCVN01000587.1 Bacteroides uniformis strain BIOML-A60 scaffold587_size1192, whole genome shotgun sequence (1192 bp)
Overview 1 RT 1: 3-799 bp Neighborhood of RT #1 [3, 1191] RVT-GII GIIM Feature: gene Location: 3-479 bp Feature: gene Location: 433-1191 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 439-514 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 439-514 bp Feature: domain Description: GIIM Note: maturase Location: 568-799 bp Feature: domain Description: GIIM Note: maturase Location: 568-7 99 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: WCVN01000065.1 Bacteroides uniformis strain BIOML-A60 scaffold65_size18606, whole genome shotgun sequence (18606 bp)
Overview 1 RT 1: 3417-7640 bp Neighborhood of RT #1 [3417, 7640] TraG-D_C RVT-GII Intron_maturas2 Feature: gene Location: 3417-3830 bp Feature: gene Location: 4126-5307 bp Feature: domain Description: TraG-D_C Location: 4654-4987 bp Feature: domain Description: TraG-D_C Location: 4654-498 7 bp Feature: gene Location: 5285-7147 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5609-6431 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5609-6431 bp Feature: domain Description: Intron_maturas2 Location: 6539-6809 bp Feature: domain Description: Intron_maturas2 Location: 6539-68 09 bp Feature: gene Location: 7189-7434 bp Feature: gene Location: 7410-7640 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TraG-D_C (pfam12696), RVT-GII, Intron_maturas2 (pfam01348)

Seq: WCVN01000071.1 Bacteroides uniformis strain BIOML-A60 scaffold71_size17632, whole genome shotgun sequence (17632 bp)
Overview 1 RT 1: 3-3068 bp Neighborhood of RT #1 [3, 3286] RVT-GII GIIM cNMP_binding Feature: gene Location: 3-1298 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-621 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-621 bp Feature: domain Description: GIIM Note: maturase Location: 675-906 bp Feature: domain Description: GIIM Note: maturase Location: 675-9 06 bp Feature: gene Location: 1252-2580 bp Feature: gene Location: 2720-3286 bp Feature: domain Description: cNMP_binding Location: 2807-3068 bp Feature: domain Description: cNMP_binding Location: 2807-3068 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), cNMP_binding (pfam00027)