myRT

myRT report for GCA_009019805.1_ASM901980v1

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Seq: WCVD01000109.1 Bacteroides uniformis strain BIOML-A50 scaffold109_size5296, whole genome shotgun sequence (5296 bp)
Overview 1 RT 1: 1146-3659 bp Neighborhood of RT #1 [1146, 3697] GDP_FS_SDR_e GDP_FS_SDR_e RVT-GII Gmd Feature: gene Location: 1146-1595 bp Feature: domain Description: GDP_FS_SDR_e Location: 1167-1569 bp Feature: domain Description: GDP_FS_SDR_e Location: 1 1 67-1 569 bp Feature: gene Location: 1588-2361 bp Feature: domain Description: GDP_FS_SDR_e Location: 1591-2335 bp Feature: domain Description: GDP_FS_SDR_e Location: 1 591 -2335 bp Feature: gene Location: 2952-3086 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2955-3066 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2955-3066 bp Feature: gene Location: 3108-3431 bp Feature: gene Location: 3476-3697 bp Feature: domain Description: Gmd Location: 3500-3659 bp Feature: domain Description: Gmd Location: 3500-3659 bp Sorry, your browser does not support inline SVG.
Associated domains:Seq: WCVD01000038.1 Bacteroides uniformis strain BIOML-A50 scaffold38_size52408, whole genome shotgun sequence (52408 bp)
Overview 1 RT 1: 42649-47204 bp Neighborhood of RT #1 [42649, 47218] AbiEii AbiEi_3_N RVT-DGRs MutS_I HTH_18 Feature: gene Location: 42649-43662 bp Feature: domain Description: AbiEii Location: 42775-43609 bp Feature: domain Description: AbiEii Location: 42 775-43609 bp Feature: gene Location: 43659-44255 bp Feature: domain Description: AbiEi_3_N Location: 43734-43977 bp Feature: domain Description: AbiEi_3_N Location: 43734-43977 bp Feature: gene Location: 44608-45882 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 44833-45523 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 44833-4552 3 bp Feature: gene Location: 45879-46337 bp Feature: domain Description: MutS_I Location: 45924-46119 bp Feature: domain Description: MutS_I Location: 4592 4-46119 bp Feature: gene Location: 46361-47218 bp Feature: domain Description: HTH_18 Location: 46970-47204 bp Feature: domain Description: HTH_18 Location: 46970-472 04 bp Sorry, your browser does not support inline SVG.
Associated domains:Seq: WCVD01000004.1 Bacteroides uniformis strain BIOML-A50 scaffold4_size139211, whole genome shotgun sequence (139211 bp)
Overview 1 RT 1: 94082-99186 bp Neighborhood of RT #1 [94082, 99186] Toprim_2 RVT-GII Intron_maturas2 Feature: gene Location: 94082-95485 bp Feature: gene Location: 95696-96625 bp Feature: domain Description: Toprim_2 Location: 96248-96536 bp Feature: domain Description: Toprim_2 Location: 96248-9653 6 bp Feature: gene Location: 96597-98405 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 96861-97683 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 96861-97683 bp Feature: domain Description: Intron_maturas2 Location: 97752-98061 bp Feature: domain Description: Intron_maturas2 Location: 97752-98061 bp Feature: gene Location: 98694-98837 bp Feature: gene Location: 98953-99186 bp Sorry, your browser does not support inline SVG.
Associated domains:Seq: WCVD01000057.1 Bacteroides uniformis strain BIOML-A50 scaffold57_size25117, whole genome shotgun sequence (25117 bp)
Overview 1 RT 1: 272-4493 bp 2 RT 2: 20326-24162 bp Neighborhood of RT #1 [272, 4513] RVT_N RVT-GII YkfC HTH_ARAC Neighborhood of RT #2 [20326, 24162] TraG-D_C RVT_N RVT-GII GIIM Feature: gene Location: 272-2008 bp Feature: domain Description: RVT_N Location: 395-638 bp Feature: domain Description: RVT_N Location: 395-638 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 683-1331 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 683-1331 bp Feature: domain Description: YkfC Location: 1541-1631 bp Feature: domain Description: YkfC Location: 154 1-1631 bp Feature: gene Location: 1962-3212 bp Feature: gene Location: 3356-4513 bp Feature: domain Description: HTH_ARAC Location: 4247-4493 bp Feature: domain Description: HTH_ARAC Location: 4 24 7-4 4 93 bp Feature: gene Location: 20326-20739 bp Feature: gene Location: 20834-22039 bp Feature: domain Description: TraG-D_C Location: 21416-21746 bp Feature: domain Description: TraG-D_C Location: 214 16-2174 6 bp Feature: gene Location: 22044-23696 bp Feature: domain Description: RVT_N Location: 22098-22341 bp Feature: domain Description: RVT_N Location: 22098-2234 1 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22386-23034 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22386-23034 bp Feature: domain Description: GIIM Note: maturase Location: 23088-23319 bp Feature: domain Description: GIIM Note: maturase Location: 23088-23319 bp Feature: gene Location: 23778-23951 bp Feature: gene Location: 24013-24162 bp Sorry, your browser does not support inline SVG.
Associated domains:Seq: WCVD01000062.1 Bacteroides uniformis strain BIOML-A50 scaffold62_size19909, whole genome shotgun sequence (19909 bp)
Overview 1 RT 1: 15932-19883 bp Neighborhood of RT #1 [15932, 19883] cNMP_binding RVT_N RVT-GII GIIM Feature: gene Location: 15932-16498 bp Feature: domain Description: cNMP_binding Location: 16019-16280 bp Feature: domain Description: cNMP_binding Location: 16019-16280 bp Feature: gene Location: 16638-17966 bp Feature: gene Location: 17920-19587 bp Feature: domain Description: RVT_N Location: 17974-18217 bp Feature: domain Description: RVT_N Location: 17974-18217 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18262-18910 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18262-18910 bp Feature: domain Description: GIIM Note: maturase Location: 18964-19195 bp Feature: domain Description: GIIM Note: maturase Location: 18964-19195 bp Feature: gene Location: 19602-19883 bp Sorry, your browser does not support inline SVG.
Associated domains:Seq: WCVD01000094.1 Bacteroides uniformis strain BIOML-A50 scaffold94_size7602, whole genome shotgun sequence (7602 bp)
Overview 1 RT 1: 135-4358 bp Neighborhood of RT #1 [135, 4358] TraG-D_C RVT-GII Intron_maturas2 Feature: gene Location: 135-548 bp Feature: gene Location: 844-2025 bp Feature: domain Description: TraG-D_C Location: 1372-1705 bp Feature: domain Description: TraG-D_C Location: 1372-1705 bp Feature: gene Location: 2003-3805 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2267-3089 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 226 7-3089 bp Feature: domain Description: Intron_maturas2 Location: 3197-3467 bp Feature: domain Description: Intron_maturas2 Location: 3197-346 7 bp Feature: gene Location: 3907-4167 bp Feature: gene Location: 4128-4358 bp Sorry, your browser does not support inline SVG.
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