myRT

myRT report for GCA_009020035.1_ASM902003v1

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Seq: WCUV01000011.1 Bacteroides uniformis strain BIOML-A42 scaffold11_size201746, whole genome shotgun sequence (201746 bp)
Overview 1 RT 1: 62996-64539 bp 2 RT 2: 182044-185553 bp Neighborhood of RT #1 [62996, 64539] HTH_28 RVT-GII Neighborhood of RT #2 [182044, 185553] DUF4133 DUF4134 RVT-GII Intron_maturas2 HNHc DUF4134 Feature: gene Location: 62996-63148 bp Feature: gene Location: 63326-63616 bp Feature: domain Description: HTH_28 Location: 63350-63494 bp Feature: domain Description: HTH_28 Location: 63350-63494 bp Feature: gene Location: 63737-63934 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 63740-63932 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 63740-63932 bp Feature: gene Location: 63964-64173 bp Feature: gene Location: 64177-64539 bp Feature: gene Location: 182044-182340 bp Feature: domain Description: DUF4133 Location: 182086-182263 bp Feature: domain Description: DUF41 33 Location: 1 82086-1 82263 bp Feature: gene Location: 182353-182547 bp Feature: domain Description: DUF4134 Location: 182443-182533 bp Feature: domain Description: DUF41 34 Location: 1 82443-1 82533 bp Feature: gene Location: 182572-184383 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 182836-183658 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 82836-1 83658 bp Feature: domain Description: Intron_maturas2 Location: 183847-184057 bp Feature: domain Description: Intron_maturas2 Location: 1 83847-1 84057 bp Feature: domain Description: HNHc Note: nucleases Location: 184207-184312 bp Feature: domain Description: HNHc Note: nucleases Location: 1 84207-1 8431 2 bp Feature: gene Location: 184925-185203 bp Feature: domain Description: DUF4134 Location: 184985-185186 bp Feature: domain Description: DUF41 34 Location: 1 84985-1 851 86 bp Feature: gene Location: 185227-185553 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_28 (pfam13518), RVT-GII, DUF4133 (pfam13571), DUF4134 (pfam13572), Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: WCUV01000016.1 Bacteroides uniformis strain BIOML-A42 scaffold16_size101618, whole genome shotgun sequence (101618 bp)
Overview 1 RT 1: 71940-75873 bp Neighborhood of RT #1 [71940, 75873] RVT-UG27 Feature: gene Location: 71940-72587 bp Feature: gene Location: 72601-73269 bp Feature: gene Location: 73262-74524 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 73454-74090 bp Feature: RT Description: RVT-UG2 7 Note: UG2 7 RT Location: 73454-74090 bp Feature: gene Location: 74847-75344 bp Feature: gene Location: 75394-75873 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG27

Seq: WCUV01000022.1 Bacteroides uniformis strain BIOML-A42 scaffold22_size68920, whole genome shotgun sequence (68920 bp)
Overview 1 RT 1: 56042-61669 bp Neighborhood of RT #1 [56042, 61704] DUF4133 Bac_Flav_CT_G RVT_N RVT-GII GIIM Bac_Flav_CT_G DUF3876 Feature: gene Location: 56042-56374 bp Feature: domain Description: DUF4133 Location: 56060-56330 bp Feature: domain Description: DUF413 3 Location: 56060-563 3 0 bp Feature: gene Location: 56371-58458 bp Feature: domain Description: Bac_Flav_CT_G Location: 56374-58402 bp Feature: domain Description: Bac_Flav_CT_G Location: 563 74-58402 bp Feature: gene Location: 59029-60675 bp Feature: domain Description: RVT_N Location: 59083-59326 bp Feature: domain Description: RVT_N Location: 59083 -593 26 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59371-60016 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 593 71-60016 bp Feature: domain Description: GIIM Note: maturase Location: 60070-60301 bp Feature: domain Description: GIIM Note: maturase Location: 60070-603 01 bp Feature: gene Location: 60684-61274 bp Feature: domain Description: Bac_Flav_CT_G Location: 60801-61257 bp Feature: domain Description: Bac_Flav_CT_G Location: 60801-61257 bp Feature: gene Location: 61324-61704 bp Feature: domain Description: DUF3876 Location: 61405-61669 bp Feature: domain Description: DUF3 876 Location: 61405-61669 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4133 (pfam13571), Bac_Flav_CT_G (TIGR03783), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), DUF3876 (pfam12992)

Seq: WCUV01000027.1 Bacteroides uniformis strain BIOML-A42 scaffold27_size21445, whole genome shotgun sequence (21445 bp)
Overview 1 RT 1: 5415-10330 bp Neighborhood of RT #1 [5415, 10791] Bac_Flav_CT_G RVT-GII Intron_maturas2 HNHc Bac_Flav_CT_G DUF4141 Feature: gene Location: 5415-7244 bp Feature: domain Description: Bac_Flav_CT_G Location: 5418-7230 bp Feature: domain Description: Bac_Flav_CT_G Location: 54 18-7230 bp Feature: gene Location: 7272-7445 bp Feature: gene Location: 7791-9602 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8055-8877 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8055-8877 bp Feature: domain Description: Intron_maturas2 Location: 8952-9267 bp Feature: domain Description: Intron_maturas2 Location: 8952-9267 bp Feature: domain Description: HNHc Note: nucleases Location: 9423-9573 bp Feature: domain Description: HNHc Note: nucleases Location: 94 23-9573 bp Feature: gene Location: 9659-9958 bp Feature: domain Description: Bac_Flav_CT_G Location: 9692-9956 bp Feature: domain Description: Bac_Flav_CT_G Location: 9692-9956 bp Feature: gene Location: 10159-10791 bp Feature: domain Description: DUF4141 Location: 10189-10330 bp Feature: domain Description: DUF4 14 1 Location: 10189-10330 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Bac_Flav_CT_G (TIGR03783), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), DUF4141 (pfam13605)

Seq: WCUV01000007.1 Bacteroides uniformis strain BIOML-A42 scaffold7_size476623, whole genome shotgun sequence (476623 bp)
Overview 1 RT 1: 225492-228871 bp Neighborhood of RT #1 [225492, 228871] RVT-DGRs Feature: gene Location: 225492-225986 bp Feature: gene Location: 226024-226200 bp Feature: gene Location: 226220-227035 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 226553-226877 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2265 5 3-226877 bp Feature: gene Location: 227319-227522 bp Feature: gene Location: 227552-228871 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs