myRT

myRT report for GCA_009020255.1_ASM902025v1

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Seq: WCUK01000010.1 Bacteroides uniformis strain BIOML-A31 scaffold10_size156661, whole genome shotgun sequence (156661 bp)
Overview 1 RT 1: 46430-48907 bp Neighborhood of RT #1 [46430, 48907] Phage_holin_4_1 RVT-DGRs Feature: gene Location: 46430-46900 bp Feature: domain Description: Phage_holin_4_1 Location: 46517-46829 bp Feature: domain Description: Phage_holin_4_1 Location: 4651 7-46829 bp Feature: gene Location: 46902-47273 bp Feature: gene Location: 47251-48285 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 47461-48073 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 47461 -48073 bp Feature: gene Location: 48400-48570 bp Feature: gene Location: 48563-48907 bp Sorry, your browser does not support inline SVG.
Associated domains:Seq: WCUK01000017.1 Bacteroides uniformis strain BIOML-A31 scaffold17_size86562, whole genome shotgun sequence (86562 bp)
Overview 1 RT 1: 23844-27991 bp Neighborhood of RT #1 [23844, 27991] TipAS COG2369 LPD3 RVT-DGRs Feature: gene Location: 23844-25055 bp Feature: domain Description: TipAS Location: 23868-24171 bp Feature: domain Description: TipAS Location: 2 3868-2 4171 bp Feature: domain Description: COG2369 Location: 24291-24477 bp Feature: domain Description: COG2 369 Location: 2 42 91-2 4477 bp Feature: domain Description: LPD3 Location: 24696-24978 bp Feature: domain Description: LPD3 Location: 2 4696-2 4978 bp Feature: gene Location: 25153-25386 bp Feature: gene Location: 25762-27063 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 25975-26569 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2 5975-2 6569 bp Feature: gene Location: 27060-27545 bp Feature: gene Location: 27749-27991 bp Sorry, your browser does not support inline SVG.
Associated domains:Seq: WCUK01000024.1 Bacteroides uniformis strain BIOML-A31 scaffold24_size53395, whole genome shotgun sequence (53395 bp)
Overview 1 RT 1: 2684-5514 bp Neighborhood of RT #1 [2684, 5514] RVT-DGRs Feature: gene Location: 2684-2917 bp Feature: gene Location: 3115-3270 bp Feature: gene Location: 3296-4597 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3509-4103 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3 509-4103 bp Feature: gene Location: 4597-5082 bp Feature: gene Location: 5272-5514 bp Sorry, your browser does not support inline SVG.
Associated domains:Seq: WCUK01000025.1 Bacteroides uniformis strain BIOML-A31 scaffold25_size62725, whole genome shotgun sequence (62973 bp)
Overview 1 RT 1: 52861-58796 bp Neighborhood of RT #1 [52861, 58867] RVT-DGRs Dam Feature: gene Location: 52861-53760 bp Feature: gene Location: 53774-55210 bp Feature: gene Location: 55516-57417 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 56284-56875 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 56284 -56875 bp Feature: gene Location: 57431-57841 bp Feature: gene Location: 58025-58867 bp Feature: domain Description: Dam Location: 58028-58796 bp Feature: domain Description: Dam Location: 58028-58796 bp Sorry, your browser does not support inline SVG.
Associated domains:Seq: WCUK01000002.1 Bacteroides uniformis strain BIOML-A31 scaffold2_size411395, whole genome shotgun sequence (411395 bp)
Overview 1 RT 1: 226365-229213 bp Neighborhood of RT #1 [226365, 229281] RVT-Retrons COG3943 Feature: gene Location: 226365-226520 bp Feature: gene Location: 226648-226863 bp Feature: gene Location: 226888-227745 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 227050-227575 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 22705 0-2275 75 bp Feature: gene Location: 227776-228651 bp Feature: gene Location: 228916-229281 bp Feature: domain Description: COG3943 Location: 228958-229213 bp Feature: domain Description: COG3943 Location: 22895 8-229213 bp Sorry, your browser does not support inline SVG.
Associated domains:Seq: WCUK01000033.1 Bacteroides uniformis strain BIOML-A31 scaffold33_size25816, whole genome shotgun sequence (25816 bp)
Overview 1 RT 1: 22112-25697 bp Neighborhood of RT #1 [22112, 25697] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 22112-22678 bp Feature: gene Location: 22797-23423 bp Feature: gene Location: 23410-25380 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23833-24655 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23833-246 55 bp Feature: domain Description: Intron_maturas2 Location: 24817-25036 bp Feature: domain Description: Intron_maturas2 Location: 24817-25036 bp Feature: domain Description: HNHc Note: nucleases Location: 25201-25357 bp Feature: domain Description: HNHc Note: nucleases Location: 25201-25357 bp Feature: gene Location: 25542-25697 bp Sorry, your browser does not support inline SVG.
Associated domains:Seq: WCUK01000051.1 Bacteroides uniformis strain BIOML-A31 scaffold51_size8906, whole genome shotgun sequence (8906 bp)
Overview 1 RT 1: 264-5551 bp Neighborhood of RT #1 [264, 5595] Bac_Flav_CT_G RVT-GII Intron_maturas2 HNHc Bac_Flav_CT_G DUF4133 Feature: gene Location: 264-1349 bp Feature: domain Description: Bac_Flav_CT_G Location: 393-1341 bp Feature: domain Description: Bac_Flav_CT_G Location: 393-1341 bp Feature: gene Location: 1339-3147 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1603-2425 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1603-2425 bp Feature: domain Description: Intron_maturas2 Location: 2494-2806 bp Feature: domain Description: Intron_maturas2 Location: 2494-2806 bp Feature: domain Description: HNHc Note: nucleases Location: 2980-3121 bp Feature: domain Description: HNHc Note: nucleases Location: 2980-3121 bp Feature: gene Location: 3713-5263 bp Feature: domain Description: Bac_Flav_CT_G Location: 3716-5243 bp Feature: domain Description: Bac_Flav_CT_G Location: 37 16-5243 bp Feature: gene Location: 5272-5595 bp Feature: domain Description: DUF4133 Location: 5287-5551 bp Feature: domain Description: DUF4133 Location: 5287 -5551 bp Sorry, your browser does not support inline SVG.
Associated domains:Seq: WCUK01000009.1 Bacteroides uniformis strain BIOML-A31 scaffold9_size338092, whole genome shotgun sequence (338092 bp)
Overview 1 RT 1: 228433-230946 bp Neighborhood of RT #1 [228433, 230984] GDP_FS_SDR_e GDP_FS_SDR_e RVT-GII Gmd Feature: gene Location: 228433-228882 bp Feature: domain Description: GDP_FS_SDR_e Location: 228454-228856 bp Feature: domain Description: GDP_FS_SDR_e Location: 228 454-228 8 56 bp Feature: gene Location: 228875-229648 bp Feature: domain Description: GDP_FS_SDR_e Location: 228878-229622 bp Feature: domain Description: GDP_FS_SDR_e Location: 228 8 78 -229622 bp Feature: gene Location: 230239-230373 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 230242-230353 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 230242-230353 bp Feature: gene Location: 230395-230718 bp Feature: gene Location: 230763-230984 bp Feature: domain Description: Gmd Location: 230787-230946 bp Feature: domain Description: Gmd Location: 23078 7-230946 bp Sorry, your browser does not support inline SVG.
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