myRT

myRT report for GCA_009020375.1_ASM902037v1

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Seq: WCUF01000040.1 Bacteroides uniformis strain BIOML-A26 scaffold40_size9933, whole genome shotgun sequence (9933 bp)
Overview 1 RT 1: 1-5882 bp Neighborhood of RT #1 [1, 5893] RVT-GII Intron_maturas2 HNHc YWFCY TrwB_AAD_bind Feature: gene Location: 1-1221 bp Feature: gene Location: 1353-1970 bp Feature: gene Location: 1957-3927 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2380-3202 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2380-3202 bp Feature: domain Description: Intron_maturas2 Location: 3364-3583 bp Feature: domain Description: Intron_maturas2 Location: 3364-3583 bp Feature: domain Description: HNHc Note: nucleases Location: 3748-3904 bp Feature: domain Description: HNHc Note: nucleases Location: 3748-3904 bp Feature: gene Location: 4089-4244 bp Feature: gene Location: 4352-5893 bp Feature: domain Description: YWFCY Location: 4361-4538 bp Feature: domain Description: YWFCY Location: 4361 -4538 bp Feature: domain Description: TrwB_AAD_bind Location: 5690-5882 bp Feature: domain Description: TrwB_AAD_bind Location: 5690-5882 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), YWFCY (pfam14293), TrwB_AAD_bind (pfam10412)

Seq: WCUF01000057.1 Bacteroides uniformis strain BIOML-A26 scaffold57_size2742, whole genome shotgun sequence (2742 bp)
Overview 1 RT 1: 1-2585 bp Neighborhood of RT #1 [1, 2585] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 1-159 bp Feature: gene Location: 269-2077 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 533-1355 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 533-1355 bp Feature: domain Description: Intron_maturas2 Location: 1424-1736 bp Feature: domain Description: Intron_maturas2 Location: 142 4-1736 bp Feature: domain Description: HNHc Note: nucleases Location: 1910-2051 bp Feature: domain Description: HNHc Note: nucleases Location: 1910-2 051 bp Feature: gene Location: 2085-2585 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: WCUF01000005.1 Bacteroides uniformis strain BIOML-A26 scaffold5_size282620, whole genome shotgun sequence (282620 bp)
Overview 1 RT 1: 71286-73369 bp Neighborhood of RT #1 [71286, 73395] Gmd RVT-GII GDP_FS_SDR_e Feature: gene Location: 71286-71507 bp Feature: domain Description: Gmd Location: 71310-71469 bp Feature: domain Description: Gmd Location: 713 10-71469 bp Feature: gene Location: 71552-71875 bp Feature: gene Location: 71897-72031 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 71900-72011 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 71900-72011 bp Feature: gene Location: 72278-72415 bp Feature: gene Location: 72622-73395 bp Feature: domain Description: GDP_FS_SDR_e Location: 72625-73369 bp Feature: domain Description: GDP_FS_SDR_e Location: 72625-73 3 69 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Gmd (COG1089), RVT-GII, GDP_FS_SDR_e (cd05239)

Seq: WCUF01000008.1 Bacteroides uniformis strain BIOML-A26 scaffold8_size165799, whole genome shotgun sequence (165799 bp)
Overview 1 RT 1: 51274-56833 bp Neighborhood of RT #1 [51274, 56904] RVT-DGRs Dam Feature: gene Location: 51274-52173 bp Feature: gene Location: 52187-53623 bp Feature: gene Location: 53982-55454 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 54321-54912 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 54 321-54 912 bp Feature: gene Location: 55468-55878 bp Feature: gene Location: 56062-56904 bp Feature: domain Description: Dam Location: 56065-56833 bp Feature: domain Description: Dam Location: 56065-56833 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Dam (pfam05869)

Seq: WCUF01000091.1 Bacteroides uniformis strain BIOML-A26 scaffold91_size1397, whole genome shotgun sequence (1397 bp)
Overview 1 RT 1: 74-881 bp Neighborhood of RT #1 [74, 1375] RVT-DGRs Feature: gene Location: 74-1375 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 287-881 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 287-881 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: WCUF01000098.1 Bacteroides uniformis strain BIOML-A26 scaffold98_size1227, whole genome shotgun sequence (1227 bp)
Overview 1 RT 1: 1-1014 bp Neighborhood of RT #1 [1, 1226] Phage_holin_4_1 RVT-DGRs Feature: gene Location: 1-396 bp Feature: domain Description: Phage_holin_4_1 Location: 88-394 bp Feature: domain Description: Phage_holin_4_1 Location: 88-394 bp Feature: gene Location: 398-769 bp Feature: gene Location: 747-1226 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 750-1014 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 750-1014 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_holin_4_1 (pfam05105), RVT-DGRs