myRT

myRT report for GCA_009020445.1_ASM902044v1

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Seq: WCTY01000021.1 Bacteroides uniformis strain BIOML-A19 scaffold21_size98530, whole genome shotgun sequence (98530 bp)
Overview 1 RT 1: 91110-94873 bp Neighborhood of RT #1 [91110, 94944] RVT-DGRs Phage_holin_4_1 Feature: gene Location: 91110-92444 bp Feature: gene Location: 92488-92832 bp Feature: gene Location: 93089-94123 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 93299-93911 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 93299-9391 1 bp Feature: gene Location: 94101-94472 bp Feature: gene Location: 94474-94944 bp Feature: domain Description: Phage_holin_4_1 Location: 94561-94873 bp Feature: domain Description: Phage_holin_4_1 Location: 94561 -94873 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Phage_holin_4_1 (pfam05105)

Seq: WCTY01000026.1 Bacteroides uniformis strain BIOML-A19 scaffold26_size86843, whole genome shotgun sequence (86843 bp)
Overview 1 RT 1: 62920-71331 bp Neighborhood of RT #1 [62920, 73127] Arm-DNA-bind_5 Phage_int_SAM_5 INTN1_C_like RVT-DGRs Laminin_G_3 pfam08757 LRR_AMN1 Feature: gene Location: 62920-64065 bp Feature: domain Description: Arm-DNA-bind_5 Location: 62944-63190 bp Feature: domain Description: Arm-DNA-bind_5 Location: 62 944-63190 bp Feature: domain Description: Phage_int_SAM_5 Location: 63229-63514 bp Feature: domain Description: Phage_int_SAM_5 Location: 632 2 9-63514 bp Feature: domain Description: INTN1_C_like Location: 63553-64027 bp Feature: domain Description: INTN1_C_like Location: 63553-6402 7 bp Feature: gene Location: 64115-64609 bp Feature: gene Location: 64611-65966 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 64887-65478 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 64887-65478 bp Feature: gene Location: 66111-66278 bp Feature: gene Location: 66339-73127 bp Feature: domain Description: Laminin_G_3 Location: 68775-69156 bp Feature: domain Description: Laminin_G_3 Location: 68775-69156 bp Feature: domain Description: pfam08757 Location: 69951-70275 bp Feature: domain Description: pfam08757 Location: 69951-702 75 bp Feature: domain Description: LRR_AMN1 Location: 70887-71331 bp Feature: domain Description: LRR_AMN1 Location: 70887-71331 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Arm-DNA-bind_5 (pfam17293), Phage_int_SAM_5 (pfam13102), INTN1_C_like (cd01185), RVT-DGRs, Laminin_G_3 (pfam13385), pfam08757 (CotH;CotH kinase protein), LRR_AMN1 (sd00034)

Seq: WCTY01000041.1 Bacteroides uniformis strain BIOML-A19 scaffold41_size62909, whole genome shotgun sequence (62909 bp)
Overview 1 RT 1: 9003-12382 bp Neighborhood of RT #1 [9003, 12382] RVT-DGRs Feature: gene Location: 9003-9587 bp Feature: gene Location: 9535-9765 bp Feature: gene Location: 9731-10546 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 10064-10388 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 10064-103 88 bp Feature: gene Location: 10830-11033 bp Feature: gene Location: 11063-12382 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: WCTY01000042.1 Bacteroides uniformis strain BIOML-A19 scaffold42_size62707, whole genome shotgun sequence (62707 bp)
Overview 1 RT 1: 14438-17646 bp Neighborhood of RT #1 [14438, 17646] RVT-UG27 Feature: gene Location: 14438-14716 bp Feature: gene Location: 14746-15012 bp Feature: gene Location: 15062-16324 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 15254-15890 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 15254 -15890 bp Feature: gene Location: 16317-16985 bp Feature: gene Location: 16999-17646 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG27

Seq: WCTY01000088.1 Bacteroides uniformis strain BIOML-A19 scaffold88_size2492, whole genome shotgun sequence (2492 bp)
Overview 1 RT 1: 119-1421 bp Neighborhood of RT #1 [119, 1819] RVT_N RVT-GII GIIM Feature: gene Location: 119-1819 bp Feature: domain Description: RVT_N Location: 182-425 bp Feature: domain Description: RVT_N Location: 182-425 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 470-1130 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 470-1130 bp Feature: domain Description: GIIM Note: maturase Location: 1187-1421 bp Feature: domain Description: GIIM Note: maturase Location: 1187-1421 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)