myRT

myRT report for GCA_009020535.1_ASM902053v1

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Seq: WCTW01000010.1 Bacteroides uniformis strain BIOML-A16 scaffold10_size156889, whole genome shotgun sequence (156889 bp)
Overview 1 RT 1: 96813-101163 bp Neighborhood of RT #1 [96813, 101163] NrnA RVT_N RVT-GII GIIM Feature: gene Location: 96813-97850 bp Feature: domain Description: NrnA Location: 96843-97821 bp Feature: domain Description: NrnA Location: 96843-97821 bp Feature: gene Location: 97937-98131 bp Feature: gene Location: 98790-100457 bp Feature: domain Description: RVT_N Location: 98844-99087 bp Feature: domain Description: RVT_N Location: 98844-99087 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 99132-99780 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 991 32-99780 bp Feature: domain Description: GIIM Note: maturase Location: 99834-100065 bp Feature: domain Description: GIIM Note: maturase Location: 99834-1 00065 bp Feature: gene Location: 100459-100905 bp Feature: gene Location: 100993-101163 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NrnA (COG0618), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: WCTW01000001.1 Bacteroides uniformis strain BIOML-A16 scaffold1_size450106, whole genome shotgun sequence (450106 bp)
Overview 1 RT 1: 40943-44876 bp Neighborhood of RT #1 [40943, 44876] RVT-UG27 Feature: gene Location: 40943-41590 bp Feature: gene Location: 41604-42272 bp Feature: gene Location: 42265-43527 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 42457-43093 bp Feature: RT Description: RVT-UG2 7 Note: UG2 7 RT Location: 42 457-43093 bp Feature: gene Location: 43850-44347 bp Feature: gene Location: 44397-44876 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG27

Seq: WCTW01000004.1 Bacteroides uniformis strain BIOML-A16 scaffold4_size321043, whole genome shotgun sequence (321043 bp)
Overview 1 RT 1: 121116-123629 bp 2 RT 2: 245345-248724 bp Neighborhood of RT #1 [121116, 123667] GDP_FS_SDR_e GDP_FS_SDR_e RVT-GII Gmd Neighborhood of RT #2 [245345, 248724] RVT-DGRs Feature: gene Location: 121116-121565 bp Feature: domain Description: GDP_FS_SDR_e Location: 121137-121539 bp Feature: domain Description: GDP_FS_SDR_e Location: 12113 7-12153 9 bp Feature: gene Location: 121558-122331 bp Feature: domain Description: GDP_FS_SDR_e Location: 121561-122305 bp Feature: domain Description: GDP_FS_SDR_e Location: 121561-1223 05 bp Feature: gene Location: 122922-123056 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 122925-123036 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 122925-123 03 6 bp Feature: gene Location: 123078-123401 bp Feature: gene Location: 123446-123667 bp Feature: domain Description: Gmd Location: 123470-123629 bp Feature: domain Description: Gmd Location: 123 470-123 629 bp Feature: gene Location: 245345-246664 bp Feature: gene Location: 246694-246897 bp Feature: gene Location: 247181-247996 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 247514-247838 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 247514-24783 8 bp Feature: gene Location: 247962-248192 bp Feature: gene Location: 248230-248724 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GDP_FS_SDR_e (cd05239), RVT-GII, Gmd (COG1089), RVT-DGRs

Seq: WCTW01000006.1 Bacteroides uniformis strain BIOML-A16 scaffold6_size207875, whole genome shotgun sequence (207875 bp)
Overview 1 RT 1: 123560-129184 bp Neighborhood of RT #1 [123560, 129894] AAA_25 dnaG RVT-GII Intron_maturas2 Toprim_2 Mob_Pre Mob_Pre Feature: gene Location: 123560-124627 bp Feature: domain Description: AAA_25 Location: 123695-124160 bp Feature: domain Description: AAA_25 Location: 123695-124 160 bp Feature: gene Location: 124911-125093 bp Feature: domain Description: dnaG Location: 124980-125079 bp Feature: domain Description: dnaG Location: 124 980-125079 bp Feature: gene Location: 125641-127449 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 125905-126727 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 125905-126727 bp Feature: domain Description: Intron_maturas2 Location: 126796-127105 bp Feature: domain Description: Intron_maturas2 Location: 126796-127105 bp Feature: gene Location: 127439-128362 bp Feature: domain Description: Toprim_2 Location: 127970-128252 bp Feature: domain Description: Toprim_2 Location: 127970-128252 bp Feature: gene Location: 128494-129894 bp Feature: domain Description: Mob_Pre Location: 128554-129013 bp Feature: domain Description: Mob_Pre Location: 128554 -129013 bp Feature: domain Description: Mob_Pre Location: 129031-129184 bp Feature: domain Description: Mob_Pre Location: 129031-129184 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_25 (pfam13481), dnaG (TIGR01391), RVT-GII, Intron_maturas2 (pfam01348), Toprim_2 (pfam13155), Mob_Pre (pfam01076)

Seq: WCTW01000009.1 Bacteroides uniformis strain BIOML-A16 scaffold9_size158426, whole genome shotgun sequence (158426 bp)
Overview 1 RT 1: 4201-8851 bp Neighborhood of RT #1 [4201, 8922] RVT-DGRs Dam Feature: gene Location: 4201-5637 bp Feature: gene Location: 5818-6096 bp Feature: gene Location: 6126-7469 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 6336-6927 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 6336-6927 bp Feature: gene Location: 7483-7893 bp Feature: gene Location: 8080-8922 bp Feature: domain Description: Dam Location: 8083-8851 bp Feature: domain Description: Dam Location: 8083-885 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Dam (pfam05869)