myRT

myRT report for GCA_009020575.1_ASM902057v1

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Seq: WCTT01000011.1 Bacteroides uniformis strain BIOML-A13 scaffold11_size158426, whole genome shotgun sequence (158426 bp)
Overview 1 RT 1: 149505-154226 bp Neighborhood of RT #1 [149505, 154226] Dam RVT-DGRs Feature: gene Location: 149505-150347 bp Feature: domain Description: Dam Location: 149508-150276 bp Feature: domain Description: Dam Location: 1 49508-1 50276 bp Feature: gene Location: 150534-150944 bp Feature: gene Location: 150958-152301 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 151168-151759 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 51 1 68-1 51 759 bp Feature: gene Location: 152331-152609 bp Feature: gene Location: 152790-154226 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Dam (pfam05869), RVT-DGRs

Seq: WCTT01000012.1 Bacteroides uniformis strain BIOML-A13 scaffold12_size156889, whole genome shotgun sequence (156889 bp)
Overview 1 RT 1: 96813-101163 bp Neighborhood of RT #1 [96813, 101163] NrnA RVT_N RVT-GII GIIM Feature: gene Location: 96813-97850 bp Feature: domain Description: NrnA Location: 96843-97821 bp Feature: domain Description: NrnA Location: 96843-9782 1 bp Feature: gene Location: 97937-98131 bp Feature: gene Location: 98790-100457 bp Feature: domain Description: RVT_N Location: 98844-99087 bp Feature: domain Description: RVT_N Location: 98844-99087 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 99132-99780 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 99132 -99780 bp Feature: domain Description: GIIM Note: maturase Location: 99834-100065 bp Feature: domain Description: GIIM Note: maturase Location: 99834-100065 bp Feature: gene Location: 100459-100905 bp Feature: gene Location: 100993-101163 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NrnA (COG0618), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: WCTT01000001.1 Bacteroides uniformis strain BIOML-A13 scaffold1_size451549, whole genome shotgun sequence (451549 bp)
Overview 1 RT 1: 407399-410607 bp Neighborhood of RT #1 [407399, 410607] RVT-UG27 Feature: gene Location: 407399-407677 bp Feature: gene Location: 407707-407973 bp Feature: gene Location: 408023-409285 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 408215-408851 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 408215-408851 bp Feature: gene Location: 409278-409946 bp Feature: gene Location: 409960-410607 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG27

Seq: WCTT01000006.1 Bacteroides uniformis strain BIOML-A13 scaffold6_size207875, whole genome shotgun sequence (207875 bp)
Overview 1 RT 1: 123560-129184 bp Neighborhood of RT #1 [123560, 129894] AAA_25 dnaG RVT-GII Intron_maturas2 Toprim_2 Mob_Pre Mob_Pre Feature: gene Location: 123560-124627 bp Feature: domain Description: AAA_25 Location: 123695-124160 bp Feature: domain Description: AAA_25 Location: 123695-124 160 bp Feature: gene Location: 124911-125093 bp Feature: domain Description: dnaG Location: 124980-125079 bp Feature: domain Description: dnaG Location: 124 980-125079 bp Feature: gene Location: 125641-127449 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 125905-126727 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 125905-126727 bp Feature: domain Description: Intron_maturas2 Location: 126796-127105 bp Feature: domain Description: Intron_maturas2 Location: 126796-127105 bp Feature: gene Location: 127439-128362 bp Feature: domain Description: Toprim_2 Location: 127970-128252 bp Feature: domain Description: Toprim_2 Location: 127970-128252 bp Feature: gene Location: 128494-129894 bp Feature: domain Description: Mob_Pre Location: 128554-129013 bp Feature: domain Description: Mob_Pre Location: 128554 -129013 bp Feature: domain Description: Mob_Pre Location: 129031-129184 bp Feature: domain Description: Mob_Pre Location: 129031-129184 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_25 (pfam13481), dnaG (TIGR01391), RVT-GII, Intron_maturas2 (pfam01348), Toprim_2 (pfam13155), Mob_Pre (pfam01076)

Seq: WCTT01000008.1 Bacteroides uniformis strain BIOML-A13 scaffold8_size321279, whole genome shotgun sequence (321373 bp)
Overview 1 RT 1: 121116-123629 bp 2 RT 2: 245543-248922 bp Neighborhood of RT #1 [121116, 123667] GDP_FS_SDR_e GDP_FS_SDR_e RVT-GII Gmd Neighborhood of RT #2 [245543, 248922] RVT-DGRs Feature: gene Location: 121116-121565 bp Feature: domain Description: GDP_FS_SDR_e Location: 121137-121539 bp Feature: domain Description: GDP_FS_SDR_e Location: 121137-1215 39 bp Feature: gene Location: 121558-122331 bp Feature: domain Description: GDP_FS_SDR_e Location: 121561-122305 bp Feature: domain Description: GDP_FS_SDR_e Location: 1215 61-122305 bp Feature: gene Location: 122922-123056 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 122925-123036 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 122925 -123036 bp Feature: gene Location: 123078-123401 bp Feature: gene Location: 123446-123667 bp Feature: domain Description: Gmd Location: 123470-123629 bp Feature: domain Description: Gmd Location: 123470-123629 bp Feature: gene Location: 245543-246862 bp Feature: gene Location: 246892-247095 bp Feature: gene Location: 247379-248194 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 247712-248036 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 247712-248036 bp Feature: gene Location: 248160-248390 bp Feature: gene Location: 248428-248922 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GDP_FS_SDR_e (cd05239), RVT-GII, Gmd (COG1089), RVT-DGRs