myRT

myRT report for GCA_009020585.1_ASM902058v1

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Seq: WCTU01000012.1 Bacteroides uniformis strain BIOML-A14 scaffold12_size139446, whole genome shotgun sequence (139633 bp)
Overview 1 RT 1: 5335-11040 bp Neighborhood of RT #1 [5335, 11048] RVT-G2Lc PagL MACS_AAE_MA_like Feature: gene Location: 5335-5514 bp Feature: gene Location: 5545-5883 bp Feature: gene Location: 6126-7400 bp Feature: RT Description: RVT-G2Lc Note: G2Lc RT Location: 6330-6999 bp Feature: RT Description: RVT-G2Lc Note: G2Lc RT Location: 6330-6999 bp Feature: gene Location: 7923-9173 bp Feature: domain Description: PagL Location: 8292-8595 bp Feature: domain Description: PagL Location: 8292-8595 bp Feature: gene Location: 9393-11048 bp Feature: domain Description: MACS_AAE_MA_like Location: 9435-11040 bp Feature: domain Description: MACS_AAE_MA_like Location: 9435-1 1 040 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-G2Lc, PagL (pfam09411), MACS_AAE_MA_like (cd05970)

Seq: WCTU01000014.1 Bacteroides uniformis strain BIOML-A14 scaffold14_size303176, whole genome shotgun sequence (303413 bp)
Overview 1 RT 1: 196311-201193 bp Neighborhood of RT #1 [196311, 201193] RVT_N RVT-GII GIIM Feature: gene Location: 196311-196451 bp Feature: gene Location: 196656-197939 bp Feature: gene Location: 198336-200003 bp Feature: domain Description: RVT_N Location: 198390-198633 bp Feature: domain Description: RVT_N Location: 198390-198633 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 198678-199326 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 198678-19932 6 bp Feature: domain Description: GIIM Note: maturase Location: 199380-199611 bp Feature: domain Description: GIIM Note: maturase Location: 199380-199611 bp Feature: gene Location: 199985-200299 bp Feature: gene Location: 200660-201193 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: WCTU01000004.1 Bacteroides uniformis strain BIOML-A14 scaffold4_size334961, whole genome shotgun sequence (334961 bp)
Overview 1 RT 1: 215241-220677 bp 2 RT 2: 246593-251626 bp Neighborhood of RT #1 [215241, 221663] TMAO_torS MutS_I RVT-DGRs Avd_like BF2867_like_N Neighborhood of RT #2 [246593, 251691] Hypoth_Ymh RVT-AbiP2 COG1373 DDE_Tnp_1 Feature: gene Location: 215241-217592 bp Feature: domain Description: TMAO_torS Location: 216159-217251 bp Feature: domain Description: TMAO_torS Location: 216159-217251 bp Feature: gene Location: 217594-218070 bp Feature: domain Description: MutS_I Location: 217645-217840 bp Feature: domain Description: MutS_I Location: 217645-217840 bp Feature: gene Location: 218067-219182 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 218148-218838 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 218148-21883 8 bp Feature: gene Location: 219618-220007 bp Feature: domain Description: Avd_like Location: 219660-219966 bp Feature: domain Description: Avd_like Location: 219660-219966 bp Feature: gene Location: 220098-221663 bp Feature: domain Description: BF2867_like_N Location: 220131-220677 bp Feature: domain Description: BF2867_like_N Location: 22013 1-220677 bp Feature: gene Location: 246593-246859 bp Feature: gene Location: 246932-247726 bp Feature: domain Description: Hypoth_Ymh Location: 247349-247703 bp Feature: domain Description: Hypoth_Ymh Location: 2473 49-247703 bp Feature: gene Location: 247751-249274 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 248180-248636 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 248180-24863 6 bp Feature: gene Location: 249333-250589 bp Feature: domain Description: COG1373 Location: 249336-250569 bp Feature: domain Description: COG13 73 Location: 2493 3 6-250569 bp Feature: gene Location: 250723-251691 bp Feature: domain Description: DDE_Tnp_1 Location: 251107-251626 bp Feature: domain Description: DDE_Tnp_1 Location: 251107-251626 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TMAO_torS (TIGR02956), MutS_I (pfam01624), RVT-DGRs, Avd_like (cd16376), BF2867_like_N (cd13120), Hypoth_Ymh (pfam09509), RVT-AbiP2, COG1373 (Predicted ATPase, AAA+ superfamily ), DDE_Tnp_1 (pfam01609)

Seq: WCTU01000008.1 Bacteroides uniformis strain BIOML-A14 scaffold8_size207602, whole genome shotgun sequence (207602 bp)
Overview 1 RT 1: 182923-186856 bp Neighborhood of RT #1 [182923, 186856] RVT-UG27 Feature: gene Location: 182923-183570 bp Feature: gene Location: 183584-184252 bp Feature: gene Location: 184245-185507 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 184437-185073 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 184 4 37-185073 bp Feature: gene Location: 185830-186327 bp Feature: gene Location: 186377-186856 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG27