myRT

myRT report for GCA_009020605.1_ASM902060v1

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Seq: WCTS01000011.1 Bacteroides uniformis strain BIOML-A12 scaffold11_size158426, whole genome shotgun sequence (158426 bp)
Overview 1 RT 1: 149505-154226 bp Neighborhood of RT #1 [149505, 154226] Dam RVT-DGRs Feature: gene Location: 149505-150347 bp Feature: domain Description: Dam Location: 149508-150276 bp Feature: domain Description: Dam Location: 1 49508-1 50276 bp Feature: gene Location: 150534-150944 bp Feature: gene Location: 150958-152301 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 151168-151759 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 51 1 68-1 51 759 bp Feature: gene Location: 152331-152609 bp Feature: gene Location: 152790-154226 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Dam (pfam05869), RVT-DGRs

Seq: WCTS01000012.1 Bacteroides uniformis strain BIOML-A12 scaffold12_size156889, whole genome shotgun sequence (156889 bp)
Overview 1 RT 1: 96813-101163 bp Neighborhood of RT #1 [96813, 101163] NrnA RVT_N RVT-GII GIIM Feature: gene Location: 96813-97850 bp Feature: domain Description: NrnA Location: 96843-97821 bp Feature: domain Description: NrnA Location: 96843-9782 1 bp Feature: gene Location: 97937-98131 bp Feature: gene Location: 98790-100457 bp Feature: domain Description: RVT_N Location: 98844-99087 bp Feature: domain Description: RVT_N Location: 98844-99087 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 99132-99780 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 99132 -99780 bp Feature: domain Description: GIIM Note: maturase Location: 99834-100065 bp Feature: domain Description: GIIM Note: maturase Location: 99834-100065 bp Feature: gene Location: 100459-100905 bp Feature: gene Location: 100993-101163 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NrnA (COG0618), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: WCTS01000013.1 Bacteroides uniformis strain BIOML-A12 scaffold13_size156422, whole genome shotgun sequence (156612 bp)
Overview 1 RT 1: 50990-54369 bp Neighborhood of RT #1 [50990, 54369] RVT-DGRs Feature: gene Location: 50990-52309 bp Feature: gene Location: 52339-52542 bp Feature: gene Location: 52826-53641 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 53159-53483 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 53 159-53 483 bp Feature: gene Location: 53607-53837 bp Feature: gene Location: 53785-54369 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: WCTS01000017.1 Bacteroides uniformis strain BIOML-A12 scaffold17_size125803, whole genome shotgun sequence (125861 bp)
Overview 1 RT 1: 122018-124531 bp Neighborhood of RT #1 [122018, 124569] GDP_FS_SDR_e GDP_FS_SDR_e RVT-GII Gmd Feature: gene Location: 122018-122467 bp Feature: domain Description: GDP_FS_SDR_e Location: 122039-122441 bp Feature: domain Description: GDP_FS_SDR_e Location: 122039-1224 4 1 bp Feature: gene Location: 122460-123233 bp Feature: domain Description: GDP_FS_SDR_e Location: 122463-123207 bp Feature: domain Description: GDP_FS_SDR_e Location: 1224 63-123207 bp Feature: gene Location: 123824-123958 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 123827-123938 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 123827-123938 bp Feature: gene Location: 123980-124303 bp Feature: gene Location: 124348-124569 bp Feature: domain Description: Gmd Location: 124372-124531 bp Feature: domain Description: Gmd Location: 124 372-124 531 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GDP_FS_SDR_e (cd05239), RVT-GII, Gmd (COG1089)

Seq: WCTS01000023.1 Bacteroides uniformis strain BIOML-A12 scaffold23_size80217, whole genome shotgun sequence (80465 bp)
Overview 1 RT 1: 32491-35699 bp Neighborhood of RT #1 [32491, 35699] RVT-UG27 Feature: gene Location: 32491-32769 bp Feature: gene Location: 32799-33065 bp Feature: gene Location: 33115-34377 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 33307-33943 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 33307-33943 bp Feature: gene Location: 34370-35038 bp Feature: gene Location: 35052-35699 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG27

Seq: WCTS01000005.1 Bacteroides uniformis strain BIOML-A12 scaffold5_size207875, whole genome shotgun sequence (207875 bp)
Overview 1 RT 1: 123560-129184 bp Neighborhood of RT #1 [123560, 129894] AAA_25 dnaG RVT-GII Intron_maturas2 Toprim_2 Mob_Pre Mob_Pre Feature: gene Location: 123560-124627 bp Feature: domain Description: AAA_25 Location: 123695-124160 bp Feature: domain Description: AAA_25 Location: 1236 95-12416 0 bp Feature: gene Location: 124911-125093 bp Feature: domain Description: dnaG Location: 124980-125079 bp Feature: domain Description: dnaG Location: 124980-125079 bp Feature: gene Location: 125641-127449 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 125905-126727 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 125905-126 727 bp Feature: domain Description: Intron_maturas2 Location: 126796-127105 bp Feature: domain Description: Intron_maturas2 Location: 126 796 -127105 bp Feature: gene Location: 127439-128362 bp Feature: domain Description: Toprim_2 Location: 127970-128252 bp Feature: domain Description: Toprim_2 Location: 127970-128252 bp Feature: gene Location: 128494-129894 bp Feature: domain Description: Mob_Pre Location: 128554-129013 bp Feature: domain Description: Mob_Pre Location: 128554-129013 bp Feature: domain Description: Mob_Pre Location: 129031-129184 bp Feature: domain Description: Mob_Pre Location: 129031-129184 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_25 (pfam13481), dnaG (TIGR01391), RVT-GII, Intron_maturas2 (pfam01348), Toprim_2 (pfam13155), Mob_Pre (pfam01076)