myRT

myRT report for GCA_009020645.1_ASM902064v1

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Seq: WCTR01000012.1 Bacteroides uniformis strain BIOML-A11 scaffold12_size183265, whole genome shotgun sequence (183785 bp)
Overview 1 RT 1: 49709-55414 bp Neighborhood of RT #1 [49709, 55422] RVT-G2Lc PagL MACS_AAE_MA_like Feature: gene Location: 49709-49888 bp Feature: gene Location: 49919-50257 bp Feature: gene Location: 50500-51774 bp Feature: RT Description: RVT-G2Lc Note: G2Lc RT Location: 50704-51373 bp Feature: RT Description: RVT-G2Lc Note: G2Lc RT Location: 50704-51 373 bp Feature: gene Location: 52297-53547 bp Feature: domain Description: PagL Location: 52666-52969 bp Feature: domain Description: PagL Location: 52666-52969 bp Feature: gene Location: 53767-55422 bp Feature: domain Description: MACS_AAE_MA_like Location: 53809-55414 bp Feature: domain Description: MACS_AAE_MA_like Location: 53809-5541 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-G2Lc, PagL (pfam09411), MACS_AAE_MA_like (cd05970)

Seq: WCTR01000043.1 Bacteroides uniformis strain BIOML-A11 scaffold43_size2471, whole genome shotgun sequence (2471 bp)
Overview 1 RT 1: 124-2087 bp Neighborhood of RT #1 [124, 2087] RVT_N RVT-GII GIIM Feature: gene Location: 124-1791 bp Feature: domain Description: RVT_N Location: 178-421 bp Feature: domain Description: RVT_N Location: 178-42 1 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 466-1114 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 466-1114 bp Feature: domain Description: GIIM Note: maturase Location: 1168-1399 bp Feature: domain Description: GIIM Note: maturase Location: 1168-1399 bp Feature: gene Location: 1773-2087 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: WCTR01000006.1 Bacteroides uniformis strain BIOML-A11 scaffold6_size334963, whole genome shotgun sequence (334963 bp)
Overview 1 RT 1: 215241-220677 bp 2 RT 2: 246595-251628 bp Neighborhood of RT #1 [215241, 221663] TMAO_torS MutS_I RVT-DGRs Avd_like BF2867_like_N Neighborhood of RT #2 [246595, 251693] Hypoth_Ymh RVT-AbiP2 COG1373 DDE_Tnp_1 Feature: gene Location: 215241-217592 bp Feature: domain Description: TMAO_torS Location: 216159-217251 bp Feature: domain Description: TMAO_torS Location: 216159-217251 bp Feature: gene Location: 217594-218070 bp Feature: domain Description: MutS_I Location: 217645-217840 bp Feature: domain Description: MutS_I Location: 217645-217840 bp Feature: gene Location: 218067-219182 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 218148-218838 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 218148-21883 8 bp Feature: gene Location: 219618-220007 bp Feature: domain Description: Avd_like Location: 219660-219966 bp Feature: domain Description: Avd_like Location: 219660-219966 bp Feature: gene Location: 220098-221663 bp Feature: domain Description: BF2867_like_N Location: 220131-220677 bp Feature: domain Description: BF2867_like_N Location: 22013 1-220677 bp Feature: gene Location: 246595-246861 bp Feature: gene Location: 246934-247728 bp Feature: domain Description: Hypoth_Ymh Location: 247351-247705 bp Feature: domain Description: Hypoth_Ymh Location: 2473 51-247705 bp Feature: gene Location: 247753-249276 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 248182-248638 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 248182-24863 8 bp Feature: gene Location: 249335-250591 bp Feature: domain Description: COG1373 Location: 249338-250571 bp Feature: domain Description: COG13 73 Location: 2493 3 8-250571 bp Feature: gene Location: 250725-251693 bp Feature: domain Description: DDE_Tnp_1 Location: 251109-251628 bp Feature: domain Description: DDE_Tnp_1 Location: 251109-251628 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TMAO_torS (TIGR02956), MutS_I (pfam01624), RVT-DGRs, Avd_like (cd16376), BF2867_like_N (cd13120), Hypoth_Ymh (pfam09509), RVT-AbiP2, COG1373 (Predicted ATPase, AAA+ superfamily ), DDE_Tnp_1 (pfam01609)

Seq: WCTR01000008.1 Bacteroides uniformis strain BIOML-A11 scaffold8_size207602, whole genome shotgun sequence (207602 bp)
Overview 1 RT 1: 182923-186856 bp Neighborhood of RT #1 [182923, 186856] RVT-UG27 Feature: gene Location: 182923-183570 bp Feature: gene Location: 183584-184252 bp Feature: gene Location: 184245-185507 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 184437-185073 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 184 4 37-185073 bp Feature: gene Location: 185830-186327 bp Feature: gene Location: 186377-186856 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG27