myRT

myRT report for GCA_009024655.1_ASM902465v1

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Seq: WCHZ01000011.1 Bacteroides fragilis strain AD135F_2B NODE_11_length_192806_cov_58.361570, whole genome shotgun sequence (192806 bp)
Overview 1 RT 1: 148940-153610 bp Neighborhood of RT #1 [148940, 153726] Cas2_I_II_III RVT-CRISPR Cas1_I-II-III Cmr6_III-B Cas_Cmr5 Feature: gene Location: 148940-149371 bp Feature: gene Location: 149795-150085 bp Feature: domain Description: Cas2_I_II_III Location: 149822-150032 bp Feature: domain Description: Cas2_I_II_III Location: 1 49822-1 50032 bp Feature: gene Location: 150079-152349 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 150286-150892 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 1 50286-1 50892 bp Feature: domain Description: Cas1_I-II-III Location: 151351-152308 bp Feature: domain Description: Cas1 _I-II-III Location: 1 51 351 -1 52308 bp Feature: gene Location: 152369-153313 bp Feature: domain Description: Cmr6_III-B Location: 152525-153302 bp Feature: domain Description: Cmr6_III-B Location: 1 52525-1 53302 bp Feature: gene Location: 153316-153726 bp Feature: domain Description: Cas_Cmr5 Location: 153364-153610 bp Feature: domain Description: Cas_Cmr5 Location: 1 53364-1 5361 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cas2_I_II_III (cl11442), RVT-CRISPR, Cas1_I-II-III (cl00656), Cmr6_III-B (cd09661), Cas_Cmr5 (pfam09701)

Seq: WCHZ01000001.1 Bacteroides fragilis strain AD135F_2B NODE_1_length_824632_cov_62.888930, whole genome shotgun sequence (824632 bp)
Overview 1 RT 1: 260667-269620 bp Neighborhood of RT #1 [260667, 270237] KAP_NTPase RVT_N RVT-GII GIIM N6_Mtase COG4646 Feature: gene Location: 260667-262532 bp Feature: domain Description: KAP_NTPase Location: 260706-261354 bp Feature: domain Description: KAP_NTPase Location: 2 60706-2 61354 bp Feature: gene Location: 262795-263922 bp Feature: gene Location: 263876-265543 bp Feature: domain Description: RVT_N Location: 263930-264173 bp Feature: domain Description: RVT_N Location: 2 63930-2 64173 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 264218-264866 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 642 18-2 64866 bp Feature: domain Description: GIIM Note: maturase Location: 264920-265151 bp Feature: domain Description: GIIM Note: maturase Location: 2 6492 0-2 65151 bp Feature: gene Location: 265558-265839 bp Feature: gene Location: 266200-270237 bp Feature: domain Description: N6_Mtase Location: 266725-267121 bp Feature: domain Description: N6_Mtase Location: 2 6672 5-2 6712 1 bp Feature: domain Description: COG4646 Location: 267889-269620 bp Feature: domain Description: COG4646 Location: 2 67889-2 6962 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KAP_NTPase (pfam07693), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), N6_Mtase (pfam02384), COG4646 (Adenine-specific DNA methylase, N12 class )

Seq: WCHZ01000007.1 Bacteroides fragilis strain AD135F_2B NODE_7_length_303597_cov_69.442037, whole genome shotgun sequence (303597 bp)
Overview 1 RT 1: 172018-180982 bp 2 RT 2: 225542-228775 bp Neighborhood of RT #1 [172018, 180984] RNase_Z rpsA RVT-Retrons GlnA3 Neighborhood of RT #2 [225542, 228775] RVT-UG27 Feature: gene Location: 172018-172932 bp Feature: domain Description: RNase_Z Location: 172033-172924 bp Feature: domain Description: RNase_Z Location: 17203 3 -172924 bp Feature: gene Location: 173082-174875 bp Feature: domain Description: rpsA Location: 173160-174768 bp Feature: domain Description: rpsA Location: 173 160-174768 bp Feature: gene Location: 175017-176129 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 175332-175881 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1753 3 2-175881 bp Feature: gene Location: 176336-178555 bp Feature: gene Location: 178795-180984 bp Feature: domain Description: GlnA3 Location: 178867-180982 bp Feature: domain Description: GlnA3 Location: 178867-180982 bp Feature: gene Location: 225542-225820 bp Feature: gene Location: 225850-226116 bp Feature: gene Location: 226166-227431 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 226355-226991 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 2263 55-226991 bp Feature: gene Location: 227449-228075 bp Feature: gene Location: 228119-228775 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RNase_Z (TIGR02651), rpsA (TIGR00717), RVT-Retrons, GlnA3 (COG3968), RVT-UG27