myRT

myRT report for GCA_009024935.1_ASM902493v1

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Seq: WCLM01000014.1 Bacteroides stercoris strain BIOML-A14 scaffold14_size89006, whole genome shotgun sequence (89564 bp)
Overview 1 RT 1: 22457-26291 bp Neighborhood of RT #1 [22457, 26291] Phage_holin_4_1 RVT-DGRs Feature: gene Location: 22457-22927 bp Feature: domain Description: Phage_holin_4_1 Location: 22544-22856 bp Feature: domain Description: Phage_holin_4_1 Location: 22544-22856 bp Feature: gene Location: 22929-23300 bp Feature: gene Location: 23278-24312 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 23488-24100 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 23488-241 00 bp Feature: gene Location: 24569-24913 bp Feature: gene Location: 24957-26291 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_holin_4_1 (pfam05105), RVT-DGRs

Seq: WCLM01000001.1 Bacteroides stercoris strain BIOML-A14 scaffold1_size257609, whole genome shotgun sequence (257609 bp)
Overview 1 RT 1: 85153-88590 bp Neighborhood of RT #1 [85153, 88590] RVT-DGRs Feature: gene Location: 85153-85467 bp Feature: gene Location: 85467-85844 bp Feature: gene Location: 85825-86865 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 86035-86659 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 86035-86659 bp Feature: gene Location: 86983-87132 bp Feature: gene Location: 87163-88590 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: WCLM01000021.1 Bacteroides stercoris strain BIOML-A14 scaffold21_size62115, whole genome shotgun sequence (62115 bp)
Overview 1 RT 1: 46082-51290 bp Neighborhood of RT #1 [46082, 51307] DUF3876 Bac_Flav_CT_G RVT_N RVT-GII GIIM Bac_Flav_CT_G Feature: gene Location: 46082-46396 bp Feature: domain Description: DUF3876 Location: 46136-46385 bp Feature: domain Description: DUF3 876 Location: 4613 6-463 85 bp Feature: gene Location: 46411-48798 bp Feature: domain Description: Bac_Flav_CT_G Location: 46531-48790 bp Feature: domain Description: Bac_Flav_CT_G Location: 4653 1-48790 bp Feature: gene Location: 48779-50506 bp Feature: domain Description: RVT_N Location: 48884-49127 bp Feature: domain Description: RVT_N Location: 48884-49127 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 49172-49820 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 49172-49820 bp Feature: domain Description: GIIM Note: maturase Location: 49871-50105 bp Feature: domain Description: GIIM Note: maturase Location: 49871-50105 bp Feature: gene Location: 50838-50993 bp Feature: gene Location: 51062-51307 bp Feature: domain Description: Bac_Flav_CT_G Location: 51065-51290 bp Feature: domain Description: Bac_Flav_CT_G Location: 51065-51290 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3876 (pfam12992), Bac_Flav_CT_G (TIGR03783), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: WCLM01000005.1 Bacteroides stercoris strain BIOML-A14 scaffold5_size152076, whole genome shotgun sequence (152076 bp)
Overview 1 RT 1: 89376-95366 bp Neighborhood of RT #1 [89376, 95366] RVT-DGRs Feature: gene Location: 89376-93038 bp Feature: gene Location: 93227-93640 bp Feature: gene Location: 93624-94691 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 93834-94482 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 93834 -94 4 82 bp Feature: gene Location: 94710-94970 bp Feature: gene Location: 94998-95366 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: WCLM01000060.1 Bacteroides stercoris strain BIOML-A14 scaffold60_size13712, whole genome shotgun sequence (13712 bp)
Overview 1 RT 1: 3611-10271 bp Neighborhood of RT #1 [3611, 10339] DNA_pol_A DNA_pol_A RVT-UG9 ComA-like_MBL-fold ComA-like_MBL-fold Arm-DNA-bind_5 Phage_int_SAM_5 INTN1_C_like Feature: gene Location: 3611-3805 bp Feature: gene Location: 3835-5274 bp Feature: domain Description: DNA_pol_A Location: 4495-4888 bp Feature: domain Description: DNA_pol_A Location: 4495 -4888 bp Feature: domain Description: DNA_pol_A Location: 5023-5170 bp Feature: domain Description: DNA_pol_A Location: 5 023-5 170 bp Feature: gene Location: 5271-7652 bp Feature: RT Description: RVT-UG9 Note: UG9 RT Location: 6189-6804 bp Feature: RT Description: RVT-UG9 Note: UG9 RT Location: 6189-6804 bp Feature: gene Location: 7627-8619 bp Feature: domain Description: ComA-like_MBL-fold Location: 7678-7942 bp Feature: domain Description: ComA-like_MBL-fold Location: 7678-7942 bp Feature: domain Description: ComA-like_MBL-fold Location: 8191-8359 bp Feature: domain Description: ComA-like_MBL-fold Location: 8191-835 9 bp Feature: gene Location: 9116-10339 bp Feature: domain Description: Arm-DNA-bind_5 Location: 9161-9401 bp Feature: domain Description: Arm-DNA-bind_5 Location: 9161-9401 bp Feature: domain Description: Phage_int_SAM_5 Location: 9443-9752 bp Feature: domain Description: Phage_int_SAM_5 Location: 9443-975 2 bp Feature: domain Description: INTN1_C_like Location: 9797-10271 bp Feature: domain Description: INTN1_C_like Location: 9797-10271 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DNA_pol_A (pfam00476), RVT-UG9, ComA-like_MBL-fold (cd07731), Arm-DNA-bind_5 (pfam17293), Phage_int_SAM_5 (pfam13102), INTN1_C_like (cd01185)

Seq: WCLM01000082.1 Bacteroides stercoris strain BIOML-A14 scaffold82_size2484, whole genome shotgun sequence (2484 bp)
Overview 1 RT 1: 190-2035 bp Neighborhood of RT #1 [190, 2367] matK RVT-GII Intron_maturas2 Feature: gene Location: 190-459 bp Feature: gene Location: 565-2367 bp Feature: domain Description: matK Location: 634-721 bp Feature: domain Description: matK Location: 6 34-721 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 829-1651 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 829-16 51 bp Feature: domain Description: Intron_maturas2 Location: 1801-2035 bp Feature: domain Description: Intron_maturas2 Location: 1801-2035 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT matK (CHL00002), RVT-GII, Intron_maturas2 (pfam01348)