myRT

myRT report for GCA_009025015.1_ASM902501v1

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Seq: WCLG01000115.1 Bacteroides stercoris strain BIOML-A8 scaffold115_size6729, whole genome shotgun sequence (6729 bp)
Overview 1 RT 1: 1-5031 bp Neighborhood of RT #1 [1, 5031] Prophage_tail Prophage_tail RVT-DGRs Feature: gene Location: 1-2703 bp Feature: domain Description: Prophage_tail Location: 310-535 bp Feature: domain Description: Prophage_tail Location: 31 0-535 bp Feature: domain Description: Prophage_tail Location: 1231-1474 bp Feature: domain Description: Prophage_tail Location: 1 231 -1 474 bp Feature: gene Location: 2892-3305 bp Feature: gene Location: 3289-4356 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3499-4147 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3499-41 47 bp Feature: gene Location: 4375-4635 bp Feature: gene Location: 4663-5031 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Prophage_tail (pfam06605), RVT-DGRs

Seq: WCLG01000126.1 Bacteroides stercoris strain BIOML-A8 scaffold126_size6341, whole genome shotgun sequence (6341 bp)
Overview 1 RT 1: 4221-6336 bp Neighborhood of RT #1 [4221, 6338] Bac_Flav_CT_G RVT_N RVT-GII GIIM Feature: gene Location: 4221-4466 bp Feature: domain Description: Bac_Flav_CT_G Location: 4224-4449 bp Feature: domain Description: Bac_Flav_CT_G Location: 42 2 4-4449 bp Feature: gene Location: 4678-4824 bp Feature: gene Location: 5022-6338 bp Feature: domain Description: RVT_N Location: 5127-5370 bp Feature: domain Description: RVT_N Location: 512 7-5370 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5415-6063 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5415-6063 bp Feature: domain Description: GIIM Note: maturase Location: 6114-6336 bp Feature: domain Description: GIIM Note: maturase Location: 6114-6336 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Bac_Flav_CT_G (TIGR03783), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: WCLG01000161.1 Bacteroides stercoris strain BIOML-A8 scaffold161_size5355, whole genome shotgun sequence (5355 bp)
Overview 1 RT 1: 3-5065 bp Neighborhood of RT #1 [3, 5352] COG4646 COG4646 matK RVT-GII Intron_maturas2 COG4646 Feature: gene Location: 3-1469 bp Feature: domain Description: COG4646 Location: 309-435 bp Feature: domain Description: COG4646 Location: 3 09-43 5 bp Feature: domain Description: COG4646 Location: 561-1458 bp Feature: domain Description: COG4646 Location: 561-1458 bp Feature: gene Location: 2022-3824 bp Feature: domain Description: matK Location: 2091-2178 bp Feature: domain Description: matK Location: 2091-2178 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2286-3108 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2286-3 108 bp Feature: domain Description: Intron_maturas2 Location: 3258-3492 bp Feature: domain Description: Intron_maturas2 Location: 3 258-3 492 bp Feature: gene Location: 3811-5352 bp Feature: domain Description: COG4646 Location: 3925-5065 bp Feature: domain Description: COG4646 Location: 3 925-5065 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4646 (Adenine-specific DNA methylase, N12 class ), matK (CHL00002), RVT-GII, Intron_maturas2 (pfam01348)

Seq: WCLG01000001.1 Bacteroides stercoris strain BIOML-A8 scaffold1_size58838, whole genome shotgun sequence (58838 bp)
Overview 1 RT 1: 7534-10971 bp Neighborhood of RT #1 [7534, 10971] RVT-DGRs Feature: gene Location: 7534-7848 bp Feature: gene Location: 7848-8225 bp Feature: gene Location: 8206-9246 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 8416-9040 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 84 16-904 0 bp Feature: gene Location: 9364-9513 bp Feature: gene Location: 9544-10971 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: WCLG01000050.1 Bacteroides stercoris strain BIOML-A8 scaffold50_size10046, whole genome shotgun sequence (10046 bp)
Overview 1 RT 1: 2-6605 bp Neighborhood of RT #1 [2, 6673] DNA_pol_A DNA_pol_A RVT-UG9 ComA-like_MBL-fold ComA-like_MBL-fold Arm-DNA-bind_5 Phage_int_SAM_5 INTN1_C_like Feature: gene Location: 2-139 bp Feature: gene Location: 169-1608 bp Feature: domain Description: DNA_pol_A Location: 829-1222 bp Feature: domain Description: DNA_pol_A Location: 829-1222 bp Feature: domain Description: DNA_pol_A Location: 1357-1504 bp Feature: domain Description: DNA_pol_A Location: 135 7-15 04 bp Feature: gene Location: 1605-3986 bp Feature: RT Description: RVT-UG9 Note: UG9 RT Location: 2523-3138 bp Feature: RT Description: RVT-UG9 Note: UG9 RT Location: 25 23-3138 bp Feature: gene Location: 3961-4953 bp Feature: domain Description: ComA-like_MBL-fold Location: 4012-4276 bp Feature: domain Description: ComA-like_MBL-fold Location: 4012-4276 bp Feature: domain Description: ComA-like_MBL-fold Location: 4525-4693 bp Feature: domain Description: ComA-like_MBL-fold Location: 45 25 -4693 bp Feature: gene Location: 5450-6673 bp Feature: domain Description: Arm-DNA-bind_5 Location: 5495-5735 bp Feature: domain Description: Arm-DNA-bind_5 Location: 5 495 -5 735 bp Feature: domain Description: Phage_int_SAM_5 Location: 5777-6086 bp Feature: domain Description: Phage_int_SAM_5 Location: 5 777-6086 bp Feature: domain Description: INTN1_C_like Location: 6131-6605 bp Feature: domain Description: INTN1_C_like Location: 6131-6605 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DNA_pol_A (pfam00476), RVT-UG9, ComA-like_MBL-fold (cd07731), Arm-DNA-bind_5 (pfam17293), Phage_int_SAM_5 (pfam13102), INTN1_C_like (cd01185)

Seq: WCLG01000063.1 Bacteroides stercoris strain BIOML-A8 scaffold63_size9333, whole genome shotgun sequence (9333 bp)
Overview 1 RT 1: 6017-9332 bp Neighborhood of RT #1 [6017, 9332] Phage_holin_4_1 RVT-DGRs Feature: gene Location: 6017-6487 bp Feature: domain Description: Phage_holin_4_1 Location: 6104-6416 bp Feature: domain Description: Phage_holin_4_1 Location: 6 104-6 416 bp Feature: gene Location: 6489-6860 bp Feature: gene Location: 6838-7872 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 7048-7660 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 7048-76 6 0 bp Feature: gene Location: 8129-8473 bp Feature: gene Location: 8517-9332 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_holin_4_1 (pfam05105), RVT-DGRs