myRT

myRT report for GCA_009025035.1_ASM902503v1

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Seq: WCLH01000013.1 Bacteroides stercoris strain BIOML-A9 scaffold13_size88802, whole genome shotgun sequence (88802 bp)
Overview 1 RT 1: 63274-67037 bp Neighborhood of RT #1 [63274, 67108] RVT-DGRs Phage_holin_4_1 Feature: gene Location: 63274-64608 bp Feature: gene Location: 64652-64996 bp Feature: gene Location: 65253-66287 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 65463-66075 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 65463-66075 bp Feature: gene Location: 66265-66636 bp Feature: gene Location: 66638-67108 bp Feature: domain Description: Phage_holin_4_1 Location: 66725-67037 bp Feature: domain Description: Phage_holin_4_1 Location: 66725-67037 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Phage_holin_4_1 (pfam05105)

Seq: WCLH01000001.1 Bacteroides stercoris strain BIOML-A9 scaffold1_size257510, whole genome shotgun sequence (257510 bp)
Overview 1 RT 1: 85054-88491 bp Neighborhood of RT #1 [85054, 88491] RVT-DGRs Feature: gene Location: 85054-85368 bp Feature: gene Location: 85368-85745 bp Feature: gene Location: 85726-86766 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 85936-86560 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 85936-86560 bp Feature: gene Location: 86884-87033 bp Feature: gene Location: 87064-88491 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: WCLH01000022.1 Bacteroides stercoris strain BIOML-A9 scaffold22_size62115, whole genome shotgun sequence (62115 bp)
Overview 1 RT 1: 46082-51290 bp Neighborhood of RT #1 [46082, 51307] DUF3876 Bac_Flav_CT_G RVT_N RVT-GII GIIM Bac_Flav_CT_G Feature: gene Location: 46082-46396 bp Feature: domain Description: DUF3876 Location: 46136-46385 bp Feature: domain Description: DUF3 876 Location: 4613 6-463 85 bp Feature: gene Location: 46411-48798 bp Feature: domain Description: Bac_Flav_CT_G Location: 46531-48790 bp Feature: domain Description: Bac_Flav_CT_G Location: 4653 1-48790 bp Feature: gene Location: 48779-50506 bp Feature: domain Description: RVT_N Location: 48884-49127 bp Feature: domain Description: RVT_N Location: 48884-49127 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 49172-49820 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 49172-49820 bp Feature: domain Description: GIIM Note: maturase Location: 49871-50105 bp Feature: domain Description: GIIM Note: maturase Location: 49871-50105 bp Feature: gene Location: 50838-50993 bp Feature: gene Location: 51062-51307 bp Feature: domain Description: Bac_Flav_CT_G Location: 51065-51290 bp Feature: domain Description: Bac_Flav_CT_G Location: 51065-51290 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3876 (pfam12992), Bac_Flav_CT_G (TIGR03783), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: WCLH01000061.1 Bacteroides stercoris strain BIOML-A9 scaffold61_size13753, whole genome shotgun sequence (13753 bp)
Overview 1 RT 1: 3652-10312 bp Neighborhood of RT #1 [3652, 10380] DNA_pol_A DNA_pol_A RVT-UG9 ComA-like_MBL-fold ComA-like_MBL-fold Arm-DNA-bind_5 Phage_int_SAM_5 INTN1_C_like Feature: gene Location: 3652-3846 bp Feature: gene Location: 3876-5315 bp Feature: domain Description: DNA_pol_A Location: 4536-4929 bp Feature: domain Description: DNA_pol_A Location: 4 536-4 929 bp Feature: domain Description: DNA_pol_A Location: 5064-5211 bp Feature: domain Description: DNA_pol_A Location: 5064 -5211 bp Feature: gene Location: 5312-7693 bp Feature: RT Description: RVT-UG9 Note: UG9 RT Location: 6230-6845 bp Feature: RT Description: RVT-UG9 Note: UG9 RT Location: 6230-684 5 bp Feature: gene Location: 7668-8660 bp Feature: domain Description: ComA-like_MBL-fold Location: 7719-7983 bp Feature: domain Description: ComA-like_MBL-fold Location: 7719-7983 bp Feature: domain Description: ComA-like_MBL-fold Location: 8232-8400 bp Feature: domain Description: ComA-like_MBL-fold Location: 8232-84 00 bp Feature: gene Location: 9157-10380 bp Feature: domain Description: Arm-DNA-bind_5 Location: 9202-9442 bp Feature: domain Description: Arm-DNA-bind_5 Location: 9202-94 4 2 bp Feature: domain Description: Phage_int_SAM_5 Location: 9484-9793 bp Feature: domain Description: Phage_int_SAM_5 Location: 94 84 -9793 bp Feature: domain Description: INTN1_C_like Location: 9838-10312 bp Feature: domain Description: INTN1_C_like Location: 9838-10312 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DNA_pol_A (pfam00476), RVT-UG9, ComA-like_MBL-fold (cd07731), Arm-DNA-bind_5 (pfam17293), Phage_int_SAM_5 (pfam13102), INTN1_C_like (cd01185)

Seq: WCLH01000006.1 Bacteroides stercoris strain BIOML-A9 scaffold6_size152076, whole genome shotgun sequence (152076 bp)
Overview 1 RT 1: 56711-62701 bp Neighborhood of RT #1 [56711, 62701] RVT-DGRs Feature: gene Location: 56711-57079 bp Feature: gene Location: 57107-57367 bp Feature: gene Location: 57386-58453 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 57596-58244 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 5 75 96-5 8244 bp Feature: gene Location: 58437-58850 bp Feature: gene Location: 59039-62701 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: WCLH01000085.1 Bacteroides stercoris strain BIOML-A9 scaffold85_size2484, whole genome shotgun sequence (2484 bp)
Overview 1 RT 1: 190-2035 bp Neighborhood of RT #1 [190, 2367] matK RVT-GII Intron_maturas2 Feature: gene Location: 190-459 bp Feature: gene Location: 565-2367 bp Feature: domain Description: matK Location: 634-721 bp Feature: domain Description: matK Location: 6 34-721 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 829-1651 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 829-16 51 bp Feature: domain Description: Intron_maturas2 Location: 1801-2035 bp Feature: domain Description: Intron_maturas2 Location: 1801-2035 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT matK (CHL00002), RVT-GII, Intron_maturas2 (pfam01348)