myRT

myRT report for GCA_009025075.1_ASM902507v1

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Seq: WCLE01000014.1 Bacteroides stercoris strain BIOML-A6 scaffold14_size88347, whole genome shotgun sequence (88347 bp)
Overview 1 RT 1: 21240-25074 bp Neighborhood of RT #1 [21240, 25074] Phage_holin_4_1 RVT-DGRs Feature: gene Location: 21240-21710 bp Feature: domain Description: Phage_holin_4_1 Location: 21327-21639 bp Feature: domain Description: Phage_holin_4_1 Location: 21 327-21 639 bp Feature: gene Location: 21712-22083 bp Feature: gene Location: 22061-23095 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 22271-22883 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 22271 -22883 bp Feature: gene Location: 23352-23696 bp Feature: gene Location: 23740-25074 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_holin_4_1 (pfam05105), RVT-DGRs

Seq: WCLE01000023.1 Bacteroides stercoris strain BIOML-A6 scaffold23_size62115, whole genome shotgun sequence (62115 bp)
Overview 1 RT 1: 46082-51290 bp Neighborhood of RT #1 [46082, 51307] DUF3876 Bac_Flav_CT_G RVT_N RVT-GII GIIM Bac_Flav_CT_G Feature: gene Location: 46082-46396 bp Feature: domain Description: DUF3876 Location: 46136-46385 bp Feature: domain Description: DUF3876 Location: 46136-46385 bp Feature: gene Location: 46411-48798 bp Feature: domain Description: Bac_Flav_CT_G Location: 46531-48790 bp Feature: domain Description: Bac_Flav_CT_G Location: 46531-48790 bp Feature: gene Location: 48779-50506 bp Feature: domain Description: RVT_N Location: 48884-49127 bp Feature: domain Description: RVT_N Location: 48884-4912 7 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 49172-49820 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 49172 -4982 0 bp Feature: domain Description: GIIM Note: maturase Location: 49871-50105 bp Feature: domain Description: GIIM Note: maturase Location: 49871-50105 bp Feature: gene Location: 50838-50993 bp Feature: gene Location: 51062-51307 bp Feature: domain Description: Bac_Flav_CT_G Location: 51065-51290 bp Feature: domain Description: Bac_Flav_CT_G Location: 51065-512 90 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3876 (pfam12992), Bac_Flav_CT_G (TIGR03783), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: WCLE01000037.1 Bacteroides stercoris strain BIOML-A6 scaffold37_size36895, whole genome shotgun sequence (36895 bp)
Overview 1 RT 1: 565-3640 bp Neighborhood of RT #1 [565, 3711] matK RVT-GII Intron_maturas2 Pirin Pirin_C_2 UlaG Feature: gene Location: 565-2367 bp Feature: domain Description: matK Location: 634-721 bp Feature: domain Description: matK Location: 63 4-721 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 829-1648 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 829-1648 bp Feature: domain Description: Intron_maturas2 Location: 1801-2035 bp Feature: domain Description: Intron_maturas2 Location: 1801-203 5 bp Feature: gene Location: 2354-2899 bp Feature: domain Description: Pirin Location: 2474-2555 bp Feature: domain Description: Pirin Location: 2474-2555 bp Feature: domain Description: Pirin_C_2 Location: 2636-2891 bp Feature: domain Description: Pirin_C_2 Location: 263 6-2891 bp Feature: gene Location: 2980-3711 bp Feature: domain Description: UlaG Location: 2983-3640 bp Feature: domain Description: UlaG Location: 2983 -3 640 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT matK (CHL00002), RVT-GII, Intron_maturas2 (pfam01348), Pirin (pfam02678), Pirin_C_2 (pfam17954), UlaG (COG2220)