myRT

myRT report for GCA_009025145.1_ASM902514v1

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Seq: WCLC01000013.1 Bacteroides stercoris strain BIOML-A4 scaffold13_size87010, whole genome shotgun sequence (87010 bp)
Overview 1 RT 1: 19091-22941 bp Neighborhood of RT #1 [19091, 22941] Endonuc-EcoRV dam RVT-DGRs Avd_like Feature: gene Location: 19091-19894 bp Feature: domain Description: Endonuc-EcoRV Location: 19154-19853 bp Feature: domain Description: Endonuc-EcoRV Location: 1 91 54-1 9853 bp Feature: gene Location: 19894-20814 bp Feature: domain Description: dam Location: 19903-20737 bp Feature: domain Description: dam Location: 1 9903-20737 bp Feature: gene Location: 20859-22073 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 21054-21783 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 21 054-21 783 bp Feature: gene Location: 22048-22407 bp Feature: domain Description: Avd_like Location: 22075-22381 bp Feature: domain Description: Avd_like Location: 22075-22381 bp Feature: gene Location: 22429-22941 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Endonuc-EcoRV (pfam09233), dam (TIGR00571), RVT-DGRs, Avd_like (cd16376)

Seq: WCLC01000014.1 Bacteroides stercoris strain BIOML-A4 scaffold14_size82810, whole genome shotgun sequence (82810 bp)
Overview 1 RT 1: 78942-82145 bp Neighborhood of RT #1 [78942, 82486] Arm-DNA-bind_5 Phage_int_SAM_5 INTN1_C_like INTN1_C_like RVT-GII Intron_maturas2 Feature: gene Location: 78942-79910 bp Feature: domain Description: Arm-DNA-bind_5 Location: 78978-79239 bp Feature: domain Description: Arm-DNA-bind_5 Location: 78978-792 39 bp Feature: domain Description: Phage_int_SAM_5 Location: 79308-79578 bp Feature: domain Description: Phage_int_SAM_5 Location: 79308-79578 bp Feature: domain Description: INTN1_C_like Location: 79632-79878 bp Feature: domain Description: INTN1_C_like Location: 79632 -79878 bp Feature: gene Location: 79882-80127 bp Feature: domain Description: INTN1_C_like Location: 79906-80107 bp Feature: domain Description: INTN1_C_like Location: 79906-80107 bp Feature: gene Location: 80678-82486 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 80942-81764 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 80942 -81764 bp Feature: domain Description: Intron_maturas2 Location: 81890-82145 bp Feature: domain Description: Intron_maturas2 Location: 81890-82 145 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Arm-DNA-bind_5 (pfam17293), Phage_int_SAM_5 (pfam13102), INTN1_C_like (cd01185), RVT-GII, Intron_maturas2 (pfam01348)

Seq: WCLC01000016.1 Bacteroides stercoris strain BIOML-A4 scaffold16_size87805, whole genome shotgun sequence (87805 bp)
Overview 1 RT 1: 83025-87654 bp Neighborhood of RT #1 [83025, 87743] AAA_25 RVT-GII Intron_maturas2 Toprim_2 Feature: gene Location: 83025-84092 bp Feature: domain Description: AAA_25 Location: 83160-83622 bp Feature: domain Description: AAA_25 Location: 83 160-83 622 bp Feature: gene Location: 84304-84486 bp Feature: gene Location: 85034-86842 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 85298-86120 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 85298-86120 bp Feature: domain Description: Intron_maturas2 Location: 86189-86498 bp Feature: domain Description: Intron_maturas2 Location: 86189-86498 bp Feature: gene Location: 86814-87743 bp Feature: domain Description: Toprim_2 Location: 87366-87654 bp Feature: domain Description: Toprim_2 Location: 873 66-87654 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_25 (pfam13481), RVT-GII, Intron_maturas2 (pfam01348), Toprim_2 (pfam13155)

Seq: WCLC01000005.1 Bacteroides stercoris strain BIOML-A4 scaffold5_size206951, whole genome shotgun sequence (206951 bp)
Overview 1 RT 1: 199430-203462 bp Neighborhood of RT #1 [199430, 203482] TraO Bac_Flav_CT_N RVT-GII Intron_maturas2 Bac_Flav_CT_N Feature: gene Location: 199430-200005 bp Feature: domain Description: TraO Location: 199505-200000 bp Feature: domain Description: TraO Location: 199505-200000 bp Feature: gene Location: 200008-200715 bp Feature: domain Description: Bac_Flav_CT_N Location: 200134-200695 bp Feature: domain Description: Bac_Flav_CT_N Location: 200134 -200695 bp Feature: gene Location: 200705-202516 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 200969-201791 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 200969-201791 bp Feature: domain Description: Intron_maturas2 Location: 201860-202169 bp Feature: domain Description: Intron_maturas2 Location: 201860-202169 bp Feature: gene Location: 202551-202886 bp Feature: gene Location: 203057-203482 bp Feature: domain Description: Bac_Flav_CT_N Location: 203060-203462 bp Feature: domain Description: Bac_Flav_CT_N Location: 203060-2034 62 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TraO (pfam10626), Bac_Flav_CT_N (TIGR03780), RVT-GII, Intron_maturas2 (pfam01348)

Seq: WCLC01000006.1 Bacteroides stercoris strain BIOML-A4 scaffold6_size202082, whole genome shotgun sequence (202082 bp)
Overview 1 RT 1: 71864-74684 bp Neighborhood of RT #1 [71864, 74684] RVT-DGRs Feature: gene Location: 71864-72106 bp Feature: gene Location: 72292-72741 bp Feature: gene Location: 72774-74075 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 72987-73581 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 72987-735 81 bp Feature: gene Location: 74172-74429 bp Feature: gene Location: 74451-74684 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs