myRT

myRT report for GCA_009025185.1_ASM902518v1

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Seq: WCKZ01000013.1 Bacteroides stercoris strain BIOML-A1 scaffold13_size86943, whole genome shotgun sequence (86943 bp)
Overview 1 RT 1: 18814-22664 bp Neighborhood of RT #1 [18814, 22664] Endonuc-EcoRV dam RVT-DGRs Avd_like Feature: gene Location: 18814-19617 bp Feature: domain Description: Endonuc-EcoRV Location: 18877-19576 bp Feature: domain Description: Endonuc-EcoRV Location: 1 8877-1 9576 bp Feature: gene Location: 19617-20537 bp Feature: domain Description: dam Location: 19626-20460 bp Feature: domain Description: dam Location: 1 9626-20460 bp Feature: gene Location: 20582-21796 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 20777-21506 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 20777-21 506 bp Feature: gene Location: 21771-22130 bp Feature: domain Description: Avd_like Location: 21798-22104 bp Feature: domain Description: Avd_like Location: 21 798-221 04 bp Feature: gene Location: 22152-22664 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Endonuc-EcoRV (pfam09233), dam (TIGR00571), RVT-DGRs, Avd_like (cd16376)

Seq: WCKZ01000014.1 Bacteroides stercoris strain BIOML-A1 scaffold14_size83128, whole genome shotgun sequence (83128 bp)
Overview 1 RT 1: 78942-82997 bp Neighborhood of RT #1 [78942, 83125] Arm-DNA-bind_5 Phage_int_SAM_5 INTN1_C_like INTN1_C_like RVT-GII Intron_maturas2 DDE_Tnp_1_6 Feature: gene Location: 78942-79910 bp Feature: domain Description: Arm-DNA-bind_5 Location: 78978-79239 bp Feature: domain Description: Arm-DNA-bind_5 Location: 78978-792 39 bp Feature: domain Description: Phage_int_SAM_5 Location: 79308-79578 bp Feature: domain Description: Phage_int_SAM_5 Location: 79308-79578 bp Feature: domain Description: INTN1_C_like Location: 79632-79878 bp Feature: domain Description: INTN1_C_like Location: 79632 -79878 bp Feature: gene Location: 79882-80127 bp Feature: domain Description: INTN1_C_like Location: 79906-80107 bp Feature: domain Description: INTN1_C_like Location: 79906-80107 bp Feature: gene Location: 80678-82486 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 80942-81764 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 80942 -81764 bp Feature: domain Description: Intron_maturas2 Location: 81890-82145 bp Feature: domain Description: Intron_maturas2 Location: 81890-82 145 bp Feature: gene Location: 82802-83125 bp Feature: domain Description: DDE_Tnp_1_6 Location: 82808-82997 bp Feature: domain Description: DDE_Tnp_1_6 Location: 82 808-82 997 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Arm-DNA-bind_5 (pfam17293), Phage_int_SAM_5 (pfam13102), INTN1_C_like (cd01185), RVT-GII, Intron_maturas2 (pfam01348), DDE_Tnp_1_6 (pfam13751)

Seq: WCKZ01000001.1 Bacteroides stercoris strain BIOML-A1 scaffold1_size273742, whole genome shotgun sequence (274114 bp)
Overview 1 RT 1: 247352-250172 bp Neighborhood of RT #1 [247352, 250172] RVT-DGRs Feature: gene Location: 247352-247585 bp Feature: gene Location: 247607-247864 bp Feature: gene Location: 247961-249262 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 248174-248768 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 248174-248768 bp Feature: gene Location: 249295-249744 bp Feature: gene Location: 249930-250172 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: WCKZ01000063.1 Bacteroides stercoris strain BIOML-A1 scaffold63_size6090, whole genome shotgun sequence (6090 bp)
Overview 1 RT 1: 1214-5843 bp Neighborhood of RT #1 [1214, 5932] AAA_25 RVT-GII Intron_maturas2 Toprim_2 Feature: gene Location: 1214-2281 bp Feature: domain Description: AAA_25 Location: 1349-1811 bp Feature: domain Description: AAA_25 Location: 134 9-1811 bp Feature: gene Location: 2493-2675 bp Feature: gene Location: 3223-5031 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3487-4309 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34 87-4 309 bp Feature: domain Description: Intron_maturas2 Location: 4378-4687 bp Feature: domain Description: Intron_maturas2 Location: 4 378-4 687 bp Feature: gene Location: 5021-5932 bp Feature: domain Description: Toprim_2 Location: 5555-5843 bp Feature: domain Description: Toprim_2 Location: 5555-584 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_25 (pfam13481), RVT-GII, Intron_maturas2 (pfam01348), Toprim_2 (pfam13155)

Seq: WCKZ01000066.1 Bacteroides stercoris strain BIOML-A1 scaffold66_size5175, whole genome shotgun sequence (5175 bp)
Overview 1 RT 1: 1-3874 bp Neighborhood of RT #1 [1, 3879] Bac_Flav_CT_N RVT-GII Intron_maturas2 Bac_Flav_CT_N TraO Feature: gene Location: 1-252 bp Feature: domain Description: Bac_Flav_CT_N Location: 4-232 bp Feature: domain Description: Bac_Flav_CT_N Location: 4-232 bp Feature: gene Location: 423-758 bp Feature: gene Location: 793-2604 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1057-1879 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 105 7-1879 bp Feature: domain Description: Intron_maturas2 Location: 1948-2257 bp Feature: domain Description: Intron_maturas2 Location: 1948-225 7 bp Feature: gene Location: 2594-3301 bp Feature: domain Description: Bac_Flav_CT_N Location: 2720-3281 bp Feature: domain Description: Bac_Flav_CT_N Location: 2720-3281 bp Feature: gene Location: 3304-3879 bp Feature: domain Description: TraO Location: 3379-3874 bp Feature: domain Description: TraO Location: 3379-3874 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Bac_Flav_CT_N (TIGR03780), TraO (pfam10626), RVT-GII, Intron_maturas2 (pfam01348)