myRT

myRT report for GCA_009025245.1_ASM902524v1

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Seq: WCKV01000149.1 Bacteroides salyersiae strain BIOML-A35 scaffold149_size10233, whole genome shotgun sequence (10233 bp)
Overview 1 RT 1: 6199-9555 bp Neighborhood of RT #1 [6199, 9555] Arm-DNA-bind_5 Phage_int_SAM_5 INTN1_C_like RVT-DGRs Feature: gene Location: 6199-7344 bp Feature: domain Description: Arm-DNA-bind_5 Location: 6223-6469 bp Feature: domain Description: Arm-DNA-bind_5 Location: 6223-6469 bp Feature: domain Description: Phage_int_SAM_5 Location: 6508-6793 bp Feature: domain Description: Phage_int_SAM_5 Location: 6508-6793 bp Feature: domain Description: INTN1_C_like Location: 6832-7306 bp Feature: domain Description: INTN1 _C_like Location: 6832-7306 bp Feature: gene Location: 7393-7887 bp Feature: gene Location: 7889-9184 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 8105-8696 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 81 05-8696 bp Feature: gene Location: 8831-9286 bp Feature: gene Location: 9388-9555 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Arm-DNA-bind_5 (pfam17293), Phage_int_SAM_5 (pfam13102), INTN1_C_like (cd01185), RVT-DGRs

Seq: WCKV01000179.1 Bacteroides salyersiae strain BIOML-A35 scaffold179_size6729, whole genome shotgun sequence (6729 bp)
Overview 1 RT 1: 3-3875 bp Neighborhood of RT #1 [3, 3934] Bac_Flav_CT_J RVT-GII Intron_maturas2 HNHc DUF4141 Feature: gene Location: 3-818 bp Feature: domain Description: Bac_Flav_CT_J Location: 12-819 bp Feature: domain Description: Bac_Flav_CT_J Location: 12 -819 bp Feature: gene Location: 822-1358 bp Feature: gene Location: 1351-3186 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1645-2467 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1645-2 467 bp Feature: domain Description: Intron_maturas2 Location: 2626-2995 bp Feature: domain Description: Intron_maturas2 Location: 2 62 6-2 995 bp Feature: domain Description: HNHc Note: nucleases Location: 3019-3160 bp Feature: domain Description: HNHc Note: nucleases Location: 3019-3160 bp Feature: gene Location: 3506-3667 bp Feature: gene Location: 3707-3934 bp Feature: domain Description: DUF4141 Location: 3719-3875 bp Feature: domain Description: DUF4141 Location: 3719-3875 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Bac_Flav_CT_J (TIGR03782), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), DUF4141 (pfam13605)

Seq: WCKV01000188.1 Bacteroides salyersiae strain BIOML-A35 scaffold188_size6072, whole genome shotgun sequence (6072 bp)
Overview 1 RT 1: 1002-6065 bp Neighborhood of RT #1 [1002, 6070] DUF3876 Bac_Flav_CT_G RVT_N RVT-GII GIIM Bac_Flav_CT_G Feature: gene Location: 1002-1316 bp Feature: domain Description: DUF3876 Location: 1056-1305 bp Feature: domain Description: DUF3 876 Location: 1056-13 05 bp Feature: gene Location: 1331-1912 bp Feature: domain Description: Bac_Flav_CT_G Location: 1448-1904 bp Feature: domain Description: Bac_Flav_CT_G Location: 1448-1904 bp Feature: gene Location: 1915-3615 bp Feature: domain Description: RVT_N Location: 2014-2257 bp Feature: domain Description: RVT_N Location: 2014-2257 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2302-2950 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23 02-2950 bp Feature: domain Description: GIIM Note: maturase Location: 3001-3235 bp Feature: domain Description: GIIM Note: maturase Location: 3 001-3 23 5 bp Feature: gene Location: 3653-4000 bp Feature: gene Location: 4193-6070 bp Feature: domain Description: Bac_Flav_CT_G Location: 4265-6065 bp Feature: domain Description: Bac_Flav_CT_G Location: 4265-6065 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3876 (pfam12992), Bac_Flav_CT_G (TIGR03783), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: WCKV01000020.1 Bacteroides salyersiae strain BIOML-A35 scaffold20_size57744, whole genome shotgun sequence (57681 bp)
Overview 1 RT 1: 360-4593 bp Neighborhood of RT #1 [360, 4616] RVT-CRISPR Cas1_I-II-III Cmr6_III-B Cas_Cmr5 Feature: gene Location: 360-509 bp Feature: gene Location: 1103-3376 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 1313-1916 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 1313-1916 bp Feature: domain Description: Cas1_I-II-III Location: 2378-3338 bp Feature: domain Description: Cas1_I-II-III Location: 2378-3338 bp Feature: gene Location: 3409-4197 bp Feature: domain Description: Cmr6_III-B Location: 3490-4186 bp Feature: domain Description: Cmr6_III-B Location: 34 90-4 186 bp Feature: gene Location: 4194-4616 bp Feature: domain Description: Cas_Cmr5 Location: 4266-4593 bp Feature: domain Description: Cas_Cmr5 Location: 4 266-4 593 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR, Cas1_I-II-III (cl00656), Cmr6_III-B (cd09661), Cas_Cmr5 (pfam09701)

Seq: WCKV01000251.1 Bacteroides salyersiae strain BIOML-A35 scaffold251_size2416, whole genome shotgun sequence (2416 bp)
Overview 1 RT 1: 233-1912 bp Neighborhood of RT #1 [233, 2313] RVT_N RVT-GII GIIM Feature: gene Location: 233-388 bp Feature: gene Location: 586-2313 bp Feature: domain Description: RVT_N Location: 691-934 bp Feature: domain Description: RVT_N Location: 691-934 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 979-1627 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 979-1627 bp Feature: domain Description: GIIM Note: maturase Location: 1678-1912 bp Feature: domain Description: GIIM Note: maturase Location: 1678-1912 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: WCKV01000070.1 Bacteroides salyersiae strain BIOML-A35 scaffold70_size26827, whole genome shotgun sequence (26827 bp)
Overview 1 RT 1: 22992-26825 bp Neighborhood of RT #1 [22992, 26825] RVT-DGRs Feature: gene Location: 22992-23234 bp Feature: gene Location: 23416-23661 bp Feature: gene Location: 23897-25564 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 24473-25067 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 24473-2506 7 bp Feature: gene Location: 25719-26825 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs