myRT

myRT report for GCA_009025335.1_ASM902533v1

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Seq: WCKN01000012.1 Bacteroides salyersiae strain BIOML-A27 scaffold12_size317584, whole genome shotgun sequence (317584 bp)
Overview 1 RT 1: 293540-298488 bp Neighborhood of RT #1 [293540, 298511] RVT-CRISPR Cas1_I-II-III Cmr6_III-B Cas_Cmr5 Feature: gene Location: 293540-293803 bp Feature: gene Location: 294179-294343 bp Feature: gene Location: 294998-297271 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 295208-295811 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 295208-29581 1 bp Feature: domain Description: Cas1_I-II-III Location: 296273-297233 bp Feature: domain Description: Cas1 _I-II-III Location: 296273-297233 bp Feature: gene Location: 297304-298092 bp Feature: domain Description: Cmr6_III-B Location: 297385-298081 bp Feature: domain Description: Cmr6_III-B Location: 297385-298081 bp Feature: gene Location: 298089-298511 bp Feature: domain Description: Cas_Cmr5 Location: 298161-298488 bp Feature: domain Description: Cas_Cmr5 Location: 2981 61 -298488 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR, Cas1_I-II-III (cl00656), Cmr6_III-B (cd09661), Cas_Cmr5 (pfam09701)

Seq: WCKN01000015.1 Bacteroides salyersiae strain BIOML-A27 scaffold15_size178694, whole genome shotgun sequence (178694 bp)
Overview 1 RT 1: 119799-124666 bp Neighborhood of RT #1 [119799, 124666] TraG-D_C RVT_N RVT-GII GIIM Feature: gene Location: 119799-120224 bp Feature: gene Location: 120310-121515 bp Feature: domain Description: TraG-D_C Location: 120892-121225 bp Feature: domain Description: TraG-D_C Location: 12 0892 -12 12 2 5 bp Feature: gene Location: 121520-123172 bp Feature: domain Description: RVT_N Location: 121574-121817 bp Feature: domain Description: RVT_N Location: 12 1574-12 1817 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 121862-122510 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 1862 -12 2 510 bp Feature: domain Description: GIIM Note: maturase Location: 122564-122795 bp Feature: domain Description: GIIM Note: maturase Location: 12 2 564-12 2 795 bp Feature: gene Location: 123489-123638 bp Feature: gene Location: 123890-124666 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TraG-D_C (pfam12696), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: WCKN01000003.1 Bacteroides salyersiae strain BIOML-A27 scaffold3_size592894, whole genome shotgun sequence (593018 bp)
Overview 1 RT 1: 188712-193566 bp Neighborhood of RT #1 [188712, 193566] RVT-UG27 Feature: gene Location: 188712-189314 bp Feature: gene Location: 189301-189702 bp Feature: gene Location: 189692-190957 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 189881-190517 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 189881-190517 bp Feature: gene Location: 191989-192450 bp Feature: gene Location: 192472-193566 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG27

Seq: WCKN01000004.1 Bacteroides salyersiae strain BIOML-A27 scaffold4_size417370, whole genome shotgun sequence (417370 bp)
Overview 1 RT 1: 177272-185256 bp Neighborhood of RT #1 [177272, 185256] RVT-DGRs Feature: gene Location: 177272-181798 bp Feature: gene Location: 181804-182118 bp Feature: gene Location: 182484-183530 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 182691-183318 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 182691-183318 bp Feature: gene Location: 183591-183785 bp Feature: gene Location: 183829-185256 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: WCKN01000005.1 Bacteroides salyersiae strain BIOML-A27 scaffold5_size463983, whole genome shotgun sequence (463983 bp)
Overview 1 RT 1: 216573-228264 bp Neighborhood of RT #1 [216573, 228264] CotH LRR_AMN1 RVT-DGRs Feature: gene Location: 216573-217889 bp Feature: gene Location: 217912-225477 bp Feature: domain Description: CotH Location: 221749-222637 bp Feature: domain Description: CotH Location: 221749-222637 bp Feature: domain Description: LRR_AMN1 Location: 223270-223696 bp Feature: domain Description: LRR_AMN1 Location: 223270-223696 bp Feature: gene Location: 225982-227283 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 226195-226792 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 226195 -226792 bp Feature: gene Location: 227283-227765 bp Feature: gene Location: 227974-228264 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CotH (pfam08757), LRR_AMN1 (sd00034), RVT-DGRs

Seq: WCKN01000007.1 Bacteroides salyersiae strain BIOML-A27 scaffold7_size476114, whole genome shotgun sequence (476114 bp)
Overview 1 RT 1: 370274-380444 bp Neighborhood of RT #1 [370274, 380482] Laminin_G_3 CotH LRR_AMN1 RVT-DGRs Arm-DNA-bind_5 Phage_int_SAM_5 INTN1_C_like Feature: gene Location: 370274-377062 bp Feature: domain Description: Laminin_G_3 Location: 372710-373091 bp Feature: domain Description: Laminin_G_3 Location: 372710-373091 bp Feature: domain Description: CotH Location: 373352-374294 bp Feature: domain Description: CotH Location: 373352-374294 bp Feature: domain Description: LRR_AMN1 Location: 374819-375266 bp Feature: domain Description: LRR_AMN1 Location: 374819-37526 6 bp Feature: gene Location: 377224-377442 bp Feature: gene Location: 377496-378791 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 377712-378303 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 377712-378303 bp Feature: gene Location: 378793-379287 bp Feature: gene Location: 379337-380482 bp Feature: domain Description: Arm-DNA-bind_5 Location: 379361-379607 bp Feature: domain Description: Arm-DNA-bind_5 Location: 37936 1-3796 07 bp Feature: domain Description: Phage_int_SAM_5 Location: 379646-379931 bp Feature: domain Description: Phage_int_SAM_5 Location: 3796 46 -379931 bp Feature: domain Description: INTN1_C_like Location: 379970-380444 bp Feature: domain Description: INTN1_C_like Location: 379970-380444 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), CotH (pfam08757), LRR_AMN1 (sd00034), RVT-DGRs, Arm-DNA-bind_5 (pfam17293), Phage_int_SAM_5 (pfam13102), INTN1_C_like (cd01185)