myRT

myRT report for GCA_009025535.1_ASM902553v1

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Seq: WCIG01000014.1 Bacteroides vulgatus strain RH1270 NODE_14_length_130794_cov_75.721100, whole genome shotgun sequence (130794 bp)
Overview 1 RT 1: 100389-106341 bp Neighborhood of RT #1 [100389, 106341] HTH_17 HTH_17 HTH_17 HTH_17 Arm-DNA-bind_5 Phage_int_SAM_5 INTN1_C_like RVT-Retrons Feature: gene Location: 100389-101492 bp Feature: domain Description: HTH_17 Location: 100791-100926 bp Feature: domain Description: HTH_1 7 Location: 1 00791 -1 00926 bp Feature: domain Description: HTH_17 Location: 100992-101139 bp Feature: domain Description: HTH_1 7 Location: 1 00992-1 01 1 39 bp Feature: domain Description: HTH_17 Location: 101166-101295 bp Feature: domain Description: HTH_1 7 Location: 1 01 1 66-1 01 295 bp Feature: domain Description: HTH_17 Location: 101334-101475 bp Feature: domain Description: HTH_1 7 Location: 1 01 334-1 01 475 bp Feature: gene Location: 101585-102691 bp Feature: domain Description: Arm-DNA-bind_5 Location: 101609-101816 bp Feature: domain Description: Arm-DNA-bind_5 Location: 1 01 609-1 01 81 6 bp Feature: domain Description: Phage_int_SAM_5 Location: 101873-102140 bp Feature: domain Description: Phage_int_SAM_5 Location: 1 01 873-1 021 40 bp Feature: domain Description: INTN1_C_like Location: 102200-102659 bp Feature: domain Description: INTN1 _C_like Location: 1 02200-1 02659 bp Feature: gene Location: 102800-103843 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 103022-103601 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 03022-1 03601 bp Feature: gene Location: 103984-105282 bp Feature: gene Location: 105565-106341 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_17 (pfam12728), Arm-DNA-bind_5 (pfam17293), Phage_int_SAM_5 (pfam13102), INTN1_C_like (cd01185), RVT-Retrons

Seq: WCIG01000021.1 Bacteroides vulgatus strain RH1270 NODE_21_length_88354_cov_114.206615, whole genome shotgun sequence (88354 bp)
Overview 1 RT 1: 19715-25071 bp Neighborhood of RT #1 [19715, 29192] RVT-DGRs Laminin_G_3 Laminin_G_3 Feature: gene Location: 19715-19957 bp Feature: gene Location: 20137-20622 bp Feature: gene Location: 20619-21923 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 20832-21426 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2 0832 -2 142 6 bp Feature: gene Location: 21995-22243 bp Feature: gene Location: 22446-29192 bp Feature: domain Description: Laminin_G_3 Location: 23910-24003 bp Feature: domain Description: Laminin_G_3 Location: 2 3910-2 4003 bp Feature: domain Description: Laminin_G_3 Location: 24648-25071 bp Feature: domain Description: Laminin_G_3 Location: 2 4648-2 5071 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Laminin_G_3 (pfam13385)

Seq: WCIG01000039.1 Bacteroides vulgatus strain RH1270 NODE_39_length_43074_cov_105.040468, whole genome shotgun sequence (43074 bp)
Overview 1 RT 1: 2007-11756 bp Neighborhood of RT #1 [2007, 11756] RVT-DGRs Laminin_G_3 Laminin_G_3 Feature: gene Location: 2007-2249 bp Feature: gene Location: 2428-2913 bp Feature: gene Location: 2910-4214 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3126-3717 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3 126-3 717 bp Feature: gene Location: 4718-11437 bp Feature: domain Description: Laminin_G_3 Location: 6161-6239 bp Feature: domain Description: Laminin_G_3 Location: 6161-623 9 bp Feature: domain Description: Laminin_G_3 Location: 6890-7316 bp Feature: domain Description: Laminin_G_3 Location: 6890-73 16 bp Feature: gene Location: 11451-11756 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Laminin_G_3 (pfam13385)

Seq: WCIG01000006.1 Bacteroides vulgatus strain RH1270 NODE_6_length_187743_cov_112.756913, whole genome shotgun sequence (187743 bp)
Overview 1 RT 1: 46881-50318 bp Neighborhood of RT #1 [46881, 50318] RVT-DGRs Feature: gene Location: 46881-48308 bp Feature: gene Location: 48339-48488 bp Feature: gene Location: 48606-49646 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 48816-49440 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 4 8816-4 94 4 0 bp Feature: gene Location: 49627-50004 bp Feature: gene Location: 50001-50318 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs