myRT

myRT report for GCA_009025615.1_ASM902561v1

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Seq: WCKX01000016.1 Bacteroides salyersiae strain BIOML-A37 scaffold16_size106059, whole genome shotgun sequence (106059 bp)
Overview 1 RT 1: 85672-88526 bp Neighborhood of RT #1 [85672, 88594] RVT-Retrons COG3943 Feature: gene Location: 85672-85806 bp Feature: gene Location: 85949-86170 bp Feature: gene Location: 86195-87052 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 86357-86882 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 86357-86882 bp Feature: gene Location: 87083-87964 bp Feature: gene Location: 88229-88594 bp Feature: domain Description: COG3943 Location: 88271-88526 bp Feature: domain Description: COG3943 Location: 88271 -88526 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, COG3943 (Uncharacterized conserved protein )

Seq: WCKX01000026.1 Bacteroides salyersiae strain BIOML-A37 scaffold26_size73135, whole genome shotgun sequence (73135 bp)
Overview 1 RT 1: 66973-73132 bp Neighborhood of RT #1 [66973, 73132] YWFCY RVT-GII Intron_maturas2 HNHc TraG-D_C Feature: gene Location: 66973-67533 bp Feature: gene Location: 67552-68715 bp Feature: domain Description: YWFCY Location: 67558-67735 bp Feature: domain Description: YWFCY Location: 67558-67735 bp Feature: gene Location: 69241-71058 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 69508-70330 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 69508-70330 bp Feature: domain Description: Intron_maturas2 Location: 70516-70708 bp Feature: domain Description: Intron_maturas2 Location: 70516-70708 bp Feature: domain Description: HNHc Note: nucleases Location: 70879-71029 bp Feature: domain Description: HNHc Note: nucleases Location: 70879-7102 9 bp Feature: gene Location: 71022-72020 bp Feature: domain Description: TraG-D_C Location: 71400-71733 bp Feature: domain Description: TraG-D_C Location: 71400-71733 bp Feature: gene Location: 72095-73132 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YWFCY (pfam14293), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), TraG-D_C (pfam12696)

Seq: WCKX01000060.1 Bacteroides salyersiae strain BIOML-A37 scaffold60_size14033, whole genome shotgun sequence (14033 bp)
Overview 1 RT 1: 838-4328 bp Neighborhood of RT #1 [838, 4351] RVT-CRISPR Cas1_I-II-III Cmr6_III-B Cas_Cmr5 Feature: gene Location: 838-3111 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 1048-1651 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 1048-1651 bp Feature: domain Description: Cas1_I-II-III Location: 2113-3073 bp Feature: domain Description: Cas1_I-II-III Location: 2113 -3 073 bp Feature: gene Location: 3144-3932 bp Feature: domain Description: Cmr6_III-B Location: 3225-3921 bp Feature: domain Description: Cmr6_III-B Location: 3 225-3 921 bp Feature: gene Location: 3929-4351 bp Feature: domain Description: Cas_Cmr5 Location: 4001-4328 bp Feature: domain Description: Cas_Cmr5 Location: 4001-43 28 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR, Cas1_I-II-III (cl00656), Cmr6_III-B (cd09661), Cas_Cmr5 (pfam09701)

Seq: WCKX01000006.1 Bacteroides salyersiae strain BIOML-A37 scaffold6_size210902, whole genome shotgun sequence (210902 bp)
Overview 1 RT 1: 44243-47695 bp Neighborhood of RT #1 [44243, 47695] RVT-DGRs Feature: gene Location: 44243-45670 bp Feature: gene Location: 45714-45908 bp Feature: gene Location: 45969-47015 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 46176-46803 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 4 6176-4 6803 bp Feature: gene Location: 46990-47379 bp Feature: gene Location: 47381-47695 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs