myRT

myRT report for GCA_009025695.1_ASM902569v1

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Seq: WCIJ01000001.1 Bacteroides fragilis strain HAP130N_1B NODE_1_length_987079_cov_63.056272, whole genome shotgun sequence (987079 bp)
Overview 1 RT 1: 605967-611042 bp Neighborhood of RT #1 [605967, 611042] Cas_Cmr5 Cmr6_III-B RVT-CRISPR Cas1_I-II-III Cas2_I_II_III Feature: gene Location: 605967-606377 bp Feature: domain Description: Cas_Cmr5 Location: 606015-606261 bp Feature: domain Description: Cas_Cmr5 Location: 60601 5-606261 bp Feature: gene Location: 606374-607324 bp Feature: domain Description: Cmr6_III-B Location: 606536-607313 bp Feature: domain Description: Cmr6_III-B Location: 606536-60731 3 bp Feature: gene Location: 607344-609614 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 607551-608157 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 607551 -6081 57 bp Feature: domain Description: Cas1_I-II-III Location: 608616-609573 bp Feature: domain Description: Cas1 _I-II-III Location: 60861 6-609573 bp Feature: gene Location: 609608-609898 bp Feature: domain Description: Cas2_I_II_III Location: 609635-609845 bp Feature: domain Description: Cas2_I_II_III Location: 609635-609845 bp Feature: gene Location: 610878-611042 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cas_Cmr5 (pfam09701), Cmr6_III-B (cd09661), RVT-CRISPR, Cas1_I-II-III (cl00656), Cas2_I_II_III (cl11442)

Seq: WCIJ01000004.1 Bacteroides fragilis strain HAP130N_1B NODE_4_length_558150_cov_78.416533, whole genome shotgun sequence (558150 bp)
Overview 1 RT 1: 309071-312187 bp Neighborhood of RT #1 [309071, 312187] RVT-UG27 Feature: gene Location: 309071-309232 bp Feature: gene Location: 309271-309528 bp Feature: gene Location: 309578-310843 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 309767-310403 bp Feature: RT Description: RVT-UG2 7 Note: UG2 7 RT Location: 309767-310403 bp Feature: gene Location: 310861-311487 bp Feature: gene Location: 311531-312187 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG27

Seq: WCIJ01000008.1 Bacteroides fragilis strain HAP130N_1B NODE_8_length_282102_cov_69.006252, whole genome shotgun sequence (282102 bp)
Overview 1 RT 1: 103504-112461 bp Neighborhood of RT #1 [103504, 112469] GlnA3 RVT-Retrons rpsA RNase_Z Feature: gene Location: 103504-105693 bp Feature: domain Description: GlnA3 Location: 103579-105691 bp Feature: domain Description: GlnA3 Location: 103 579-105691 bp Feature: gene Location: 105933-108152 bp Feature: gene Location: 108359-109471 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 108674-109223 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 108674-109223 bp Feature: gene Location: 109612-111405 bp Feature: domain Description: rpsA Location: 109690-111298 bp Feature: domain Description: rpsA Location: 109690-111298 bp Feature: gene Location: 111555-112469 bp Feature: domain Description: RNase_Z Location: 111570-112461 bp Feature: domain Description: RNase_Z Location: 111570-112461 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GlnA3 (COG3968), RVT-Retrons, rpsA (TIGR00717), RNase_Z (TIGR02651)