myRT

myRT report for GCA_009025705.1_ASM902570v1

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Seq: WCIE01000001.1 Bacteroides fragilis strain HAP130N_3B NODE_1_length_987079_cov_74.543214, whole genome shotgun sequence (987079 bp)
Overview 1 RT 1: 376038-380997 bp Neighborhood of RT #1 [376038, 381113] Cas2_I_II_III RVT-CRISPR Cas1_I-II-III Cmr6_III-B Cas_Cmr5 Feature: gene Location: 376038-376202 bp Feature: gene Location: 377182-377472 bp Feature: domain Description: Cas2_I_II_III Location: 377209-377419 bp Feature: domain Description: Cas2_I_II_III Location: 377209-37741 9 bp Feature: gene Location: 377466-379736 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 377673-378279 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 377673-378279 bp Feature: domain Description: Cas1_I-II-III Location: 378738-379695 bp Feature: domain Description: Cas1 _I-II-III Location: 378738-379695 bp Feature: gene Location: 379756-380700 bp Feature: domain Description: Cmr6_III-B Location: 379912-380689 bp Feature: domain Description: Cmr6_III-B Location: 37991 2-380689 bp Feature: gene Location: 380703-381113 bp Feature: domain Description: Cas_Cmr5 Location: 380751-380997 bp Feature: domain Description: Cas_Cmr5 Location: 380751 -380997 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cas2_I_II_III (cl11442), RVT-CRISPR, Cas1_I-II-III (cl00656), Cmr6_III-B (cd09661), Cas_Cmr5 (pfam09701)

Seq: WCIE01000004.1 Bacteroides fragilis strain HAP130N_3B NODE_4_length_479474_cov_91.134441, whole genome shotgun sequence (479474 bp)
Overview 1 RT 1: 230395-233511 bp Neighborhood of RT #1 [230395, 233511] RVT-UG27 Feature: gene Location: 230395-230556 bp Feature: gene Location: 230595-230852 bp Feature: gene Location: 230902-232167 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 231091-231727 bp Feature: RT Description: RVT-UG2 7 Note: UG2 7 RT Location: 2 31091-2 3172 7 bp Feature: gene Location: 232185-232811 bp Feature: gene Location: 232855-233511 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG27

Seq: WCIE01000007.1 Bacteroides fragilis strain HAP130N_3B NODE_7_length_282102_cov_82.617544, whole genome shotgun sequence (282102 bp)
Overview 1 RT 1: 103504-112461 bp Neighborhood of RT #1 [103504, 112469] GlnA3 RVT-Retrons rpsA RNase_Z Feature: gene Location: 103504-105693 bp Feature: domain Description: GlnA3 Location: 103579-105691 bp Feature: domain Description: GlnA3 Location: 103 579-105691 bp Feature: gene Location: 105933-108152 bp Feature: gene Location: 108359-109471 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 108674-109223 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 108674-109223 bp Feature: gene Location: 109612-111405 bp Feature: domain Description: rpsA Location: 109690-111298 bp Feature: domain Description: rpsA Location: 109690-111298 bp Feature: gene Location: 111555-112469 bp Feature: domain Description: RNase_Z Location: 111570-112461 bp Feature: domain Description: RNase_Z Location: 111570-112461 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GlnA3 (COG3968), RVT-Retrons, rpsA (TIGR00717), RNase_Z (TIGR02651)