myRT

myRT report for GCA_009025805.1_ASM902580v1

Download annotations/find similar RTs

Seq: WCIC01000001.1 Bacteroides vulgatus strain CFPLTA002_1B NODE_1_length_410116_cov_72.073104, whole genome shotgun sequence (410116 bp)
Overview 1 RT 1: 127104-129923 bp Neighborhood of RT #1 [127104, 129923] Mor RVT-DGRs Feature: gene Location: 127104-127346 bp Feature: domain Description: Mor Location: 127197-127323 bp Feature: domain Description: Mor Location: 1 271 97-1 27323 bp Feature: gene Location: 127532-128017 bp Feature: gene Location: 128014-129315 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 128224-128821 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 28224-1 28821 bp Feature: gene Location: 129419-129676 bp Feature: gene Location: 129690-129923 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Mor (pfam08765), RVT-DGRs

Seq: WCIC01000004.1 Bacteroides vulgatus strain CFPLTA002_1B NODE_4_length_252473_cov_75.298883, whole genome shotgun sequence (252473 bp)
Overview 1 RT 1: 200307-209737 bp Neighborhood of RT #1 [200307, 209737] Laminin_G_3 Laminin_G_3 RVT-DGRs Feature: gene Location: 200307-207026 bp Feature: domain Description: Laminin_G_3 Location: 201750-201828 bp Feature: domain Description: Laminin_G_3 Location: 2 01750-2 0182 8 bp Feature: domain Description: Laminin_G_3 Location: 202479-202905 bp Feature: domain Description: Laminin_G_3 Location: 2 02 479-2 02 905 bp Feature: gene Location: 207271-207426 bp Feature: gene Location: 207464-208834 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 207746-208337 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2 07746-2 08337 bp Feature: gene Location: 208831-209316 bp Feature: gene Location: 209495-209737 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-DGRs

Seq: WCIC01000079.1 Bacteroides vulgatus strain CFPLTA002_1B NODE_79_length_2494_cov_313.771441, whole genome shotgun sequence (2494 bp)
Overview 1 RT 1: 63-2054 bp Neighborhood of RT #1 [63, 2374] RVT-GII Intron_maturas2 Feature: gene Location: 63-296 bp Feature: gene Location: 301-555 bp Feature: gene Location: 569-2374 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 833-1655 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 83 3 -1655 bp Feature: domain Description: Intron_maturas2 Location: 1829-2054 bp Feature: domain Description: Intron_maturas2 Location: 1829-2054 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348)

Seq: WCIC01000080.1 Bacteroides vulgatus strain CFPLTA002_1B NODE_80_length_2473_cov_148.835038, whole genome shotgun sequence (2473 bp)
Overview 1 RT 1: 321-1955 bp Neighborhood of RT #1 [321, 2350] RVT_N RVT-GII GIIM Feature: gene Location: 321-485 bp Feature: gene Location: 680-2350 bp Feature: RT Description: RVT_N Location: 734-977 bp Feature: RT Description: RVT_N Location: 734 -977 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1022-1670 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1022-1670 bp Feature: domain Description: GIIM Note: maturase Location: 1724-1955 bp Feature: domain Description: GIIM Note: maturase Location: 1724 -1955 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)