myRT

myRT report for GCA_009093695.1_ASM909369v1

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Seq: WDES01000012.1 Bacteroides xylanisolvens strain BIOML-A74 scaffold12_size119170, whole genome shotgun sequence (119170 bp)
Overview 1 RT 1: 26310-27853 bp Neighborhood of RT #1 [26310, 27853] HTH_28 RVT-GII Feature: gene Location: 26310-26462 bp Feature: gene Location: 26640-26930 bp Feature: domain Description: HTH_28 Location: 26664-26808 bp Feature: domain Description: HTH_28 Location: 26664-26808 bp Feature: gene Location: 27051-27248 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27054-27246 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27054-27246 bp Feature: gene Location: 27278-27487 bp Feature: gene Location: 27491-27853 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_28 (pfam13518), RVT-GII

Seq: WDES01000015.1 Bacteroides xylanisolvens strain BIOML-A74 scaffold15_size110000, whole genome shotgun sequence (110000 bp)
Overview 1 RT 1: 47393-50129 bp Neighborhood of RT #1 [47393, 50129] RVT_N RVT-GII GIIM Feature: gene Location: 47393-47596 bp Feature: gene Location: 47622-47756 bp Feature: gene Location: 48158-49660 bp Feature: domain Description: RVT_N Location: 48224-48467 bp Feature: domain Description: RVT_N Location: 482 2 4-48467 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 48512-49154 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 48512 -49154 bp Feature: domain Description: GIIM Note: maturase Location: 49211-49442 bp Feature: domain Description: GIIM Note: maturase Location: 492 11-49442 bp Feature: gene Location: 49746-49976 bp Feature: gene Location: 49983-50129 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: WDES01000019.1 Bacteroides xylanisolvens strain BIOML-A74 scaffold19_size102949, whole genome shotgun sequence (102949 bp)
Overview 1 RT 1: 52964-57598 bp Neighborhood of RT #1 [52964, 57598] DUF1738 RVT-GII Intron_maturas2 MPTase-PolyVal Feature: gene Location: 52964-53467 bp Feature: domain Description: DUF1738 Location: 53018-53435 bp Feature: domain Description: DUF173 8 Location: 53 018-53 43 5 bp Feature: gene Location: 53643-53900 bp Feature: gene Location: 54031-55842 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 54295-55117 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 54295-55117 bp Feature: domain Description: Intron_maturas2 Location: 55258-55498 bp Feature: domain Description: Intron_maturas2 Location: 55258-55498 bp Feature: gene Location: 55844-57163 bp Feature: domain Description: MPTase-PolyVal Location: 56114-56423 bp Feature: domain Description: MPTase-PolyVal Location: 56114-56423 bp Feature: gene Location: 57224-57598 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1738 (pfam08401), RVT-GII, Intron_maturas2 (pfam01348), MPTase-PolyVal (pfam18818)

Seq: WDES01000001.1 Bacteroides xylanisolvens strain BIOML-A74 scaffold1_size250711, whole genome shotgun sequence (250711 bp)
Overview 1 RT 1: 233205-237150 bp Neighborhood of RT #1 [233205, 237150] RVT-DGRs Feature: gene Location: 233205-233495 bp Feature: gene Location: 233505-234863 bp Feature: gene Location: 235195-236382 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 235528-236155 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 235528-236155 bp Feature: gene Location: 236345-236773 bp Feature: gene Location: 236770-237150 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: WDES01000181.1 Bacteroides xylanisolvens strain BIOML-A74 scaffold2233_size1040, whole genome shotgun sequence (1040 bp)
Overview 1 RT 1: 1-532 bp Neighborhood of RT #1 [1, 1023] RVT-DGRs Feature: gene Location: 1-1023 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 4-532 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 4-5 32 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: WDES01000029.1 Bacteroides xylanisolvens strain BIOML-A74 scaffold29_size84522, whole genome shotgun sequence (84522 bp)
Overview 1 RT 1: 66252-70819 bp Neighborhood of RT #1 [66252, 70819] DUF1566 Avd_like RVT-DGRs Feature: gene Location: 66252-67064 bp Feature: domain Description: DUF1566 Location: 66786-67038 bp Feature: domain Description: DUF156 6 Location: 6 6 786 -6 7038 bp Feature: gene Location: 67210-67590 bp Feature: domain Description: Avd_like Location: 67237-67543 bp Feature: domain Description: Avd_like Location: 6 7237-6 7543 bp Feature: gene Location: 67605-69026 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 67977-68682 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 6 7977-6 86 82 bp Feature: gene Location: 68992-69267 bp Feature: gene Location: 69350-70819 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1566 (pfam07603), Avd_like (cd16376), RVT-DGRs

Seq: WDES01000002.1 Bacteroides xylanisolvens strain BIOML-A74 scaffold2_size250353, whole genome shotgun sequence (250353 bp)
Overview 1 RT 1: 83680-93142 bp Neighborhood of RT #1 [83680, 93142] Laminin_G_3 Laminin_G_3 RVT-DGRs Feature: gene Location: 83680-90417 bp Feature: domain Description: Laminin_G_3 Location: 85141-85219 bp Feature: domain Description: Laminin_G_3 Location: 85141-85219 bp Feature: domain Description: Laminin_G_3 Location: 85870-86296 bp Feature: domain Description: Laminin_G_3 Location: 8587 0-86296 bp Feature: gene Location: 90662-90817 bp Feature: gene Location: 90934-92238 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 91147-91741 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 91147 -917 41 bp Feature: gene Location: 92235-92720 bp Feature: gene Location: 92900-93142 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-DGRs

Seq: WDES01000037.1 Bacteroides xylanisolvens strain BIOML-A74 scaffold37_size73601, whole genome shotgun sequence (73601 bp)
Overview 1 RT 1: 28598-31954 bp Neighborhood of RT #1 [28598, 31954] Arm-DNA-bind_5 Phage_int_SAM_5 INTN1_C_like RVT-DGRs Feature: gene Location: 28598-29743 bp Feature: domain Description: Arm-DNA-bind_5 Location: 28622-28868 bp Feature: domain Description: Arm-DNA-bind_5 Location: 28 622-28 8 68 bp Feature: domain Description: Phage_int_SAM_5 Location: 28907-29192 bp Feature: domain Description: Phage_int_SAM_5 Location: 28 907-29192 bp Feature: domain Description: INTN1_C_like Location: 29231-29705 bp Feature: domain Description: INTN1_C_like Location: 29231-29705 bp Feature: gene Location: 29792-30286 bp Feature: gene Location: 30288-31583 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 30504-31095 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 30504-31095 bp Feature: gene Location: 31230-31685 bp Feature: gene Location: 31787-31954 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Arm-DNA-bind_5 (pfam17293), Phage_int_SAM_5 (pfam13102), INTN1_C_like (cd01185), RVT-DGRs

Seq: WDES01000003.1 Bacteroides xylanisolvens strain BIOML-A74 scaffold3_size199040, whole genome shotgun sequence (199040 bp)
Overview 1 RT 1: 36258-39666 bp Neighborhood of RT #1 [36258, 39666] RVT-UG27 Feature: gene Location: 36258-36722 bp Feature: gene Location: 36765-36995 bp Feature: gene Location: 37084-38346 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 37276-37912 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 37276-379 12 bp Feature: gene Location: 38339-38989 bp Feature: gene Location: 39025-39666 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG27

Seq: WDES01000040.1 Bacteroides xylanisolvens strain BIOML-A74 scaffold40_size67838, whole genome shotgun sequence (67838 bp)
Overview 1 RT 1: 52324-62543 bp Neighborhood of RT #1 [52324, 62554] DUF1566 RVT-DGRs Avd_like DUF1566 Feature: gene Location: 52324-54153 bp Feature: gene Location: 54216-54569 bp Feature: gene Location: 54560-55981 bp Feature: domain Description: DUF1566 Location: 54632-54776 bp Feature: domain Description: DUF1566 Location: 54632-54776 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 54965-55706 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 54965-55706 bp Feature: gene Location: 55994-56395 bp Feature: domain Description: Avd_like Location: 56033-56372 bp Feature: domain Description: Avd_like Location: 56033-56372 bp Feature: gene Location: 56525-62554 bp Feature: domain Description: DUF1566 Location: 62237-62543 bp Feature: domain Description: DUF1566 Location: 62237-62543 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1566 (pfam07603), RVT-DGRs, Avd_like (cd16376)

Seq: WDES01000041.1 Bacteroides xylanisolvens strain BIOML-A74 scaffold41_size66370, whole genome shotgun sequence (66370 bp)
Overview 1 RT 1: 52754-65155 bp Neighborhood of RT #1 [52754, 65280] rpsA DUF4011 DEXXQc_SF1 DEXXQc_SF1 TIGR00376 MTES_1575 DUF3320 RVT-Retrons PDDEXK_2 Feature: gene Location: 52754-54553 bp Feature: domain Description: rpsA Location: 52823-54422 bp Feature: domain Description: rpsA Location: 52823-54422 bp Feature: gene Location: 54650-60691 bp Feature: domain Description: DUF4011 Location: 55880-56393 bp Feature: domain Description: DUF4011 Location: 55880-56393 bp Feature: domain Description: DEXXQc_SF1 Location: 56732-57173 bp Feature: domain Description: DEXXQc_SF1 Location: 56732-57173 bp Feature: domain Description: DEXXQc_SF1 Location: 58169-58919 bp Feature: domain Description: DEXXQc_SF1 Location: 58169-58919 bp Feature: domain Description: TIGR00376 Location: 59048-59438 bp Feature: domain Description: TIGR00376 Location: 59048-59438 bp Feature: domain Description: MTES_1575 Location: 59591-59876 bp Feature: domain Description: MTES_1575 Location: 59591-59876 bp Feature: domain Description: DUF3320 Location: 60206-60341 bp Feature: domain Description: DUF3320 Location: 60206-60341 bp Feature: gene Location: 60742-61872 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 61063-61606 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 61063-61606 bp Feature: gene Location: 62080-64287 bp Feature: gene Location: 64456-65280 bp Feature: domain Description: PDDEXK_2 Location: 64477-65155 bp Feature: domain Description: PDDEXK_2 Location: 64477-65155 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rpsA (TIGR00717), DUF4011 (pfam13195), DEXXQc_SF1 (cd18043), TIGR00376 (DNA helicase, putative), MTES_1575 (pfam18741), DUF3320 (pfam11784), RVT-Retrons, PDDEXK_2 (pfam12784)

Seq: WDES01000044.1 Bacteroides xylanisolvens strain BIOML-A74 scaffold44_size62864, whole genome shotgun sequence (62864 bp)
Overview 1 RT 1: 34256-38942 bp Neighborhood of RT #1 [34256, 38942] RVT-UG27 Feature: gene Location: 34256-34858 bp Feature: gene Location: 34941-35171 bp Feature: gene Location: 35168-36436 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 35357-35993 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 35357-35993 bp Feature: gene Location: 37460-37918 bp Feature: gene Location: 37953-38942 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG27

Seq: WDES01000072.1 Bacteroides xylanisolvens strain BIOML-A74 scaffold72_size31218, whole genome shotgun sequence (31218 bp)
Overview 1 RT 1: 110-4673 bp Neighborhood of RT #1 [110, 4687] RVT-GII Intron_maturas2 HNHc Bac_Flav_CT_G Bac_Flav_CT_G Feature: gene Location: 110-1921 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 374-1196 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 374-1196 bp Feature: domain Description: Intron_maturas2 Location: 1271-1586 bp Feature: domain Description: Intron_maturas2 Location: 1271-1586 bp Feature: domain Description: HNHc Note: nucleases Location: 1742-1892 bp Feature: domain Description: HNHc Note: nucleases Location: 1742-1892 bp Feature: gene Location: 2267-2440 bp Feature: gene Location: 2468-4687 bp Feature: domain Description: Bac_Flav_CT_G Location: 2618-4082 bp Feature: domain Description: Bac_Flav_CT_G Location: 2618-4082 bp Feature: domain Description: Bac_Flav_CT_G Location: 4238-4673 bp Feature: domain Description: Bac_Flav_CT_G Location: 4238-4673 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), Bac_Flav_CT_G (TIGR03783)