myRT

myRT report for GCA_009101965.1_ASM910196v1

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Seq: WDEI01000148.1 Bacteroides xylanisolvens strain BIOML-A63 scaffold148_size11446, whole genome shotgun sequence (11446 bp)
Overview 1 RT 1: 1-5625 bp Neighborhood of RT #1 [1, 5663] LRR_AMN1 RVT-DGRs Arm-DNA-bind_5 Phage_int_SAM_5 INTN1_C_like Feature: gene Location: 1-2472 bp Feature: domain Description: LRR_AMN1 Location: 289-733 bp Feature: domain Description: LRR_AMN1 Location: 289-733 bp Feature: gene Location: 2617-3972 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2893-3484 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2893-3484 bp Feature: gene Location: 3974-4468 bp Feature: gene Location: 4518-5663 bp Feature: domain Description: Arm-DNA-bind_5 Location: 4542-4788 bp Feature: domain Description: Arm-DNA-bind_5 Location: 4542-4788 bp Feature: domain Description: Phage_int_SAM_5 Location: 4827-5112 bp Feature: domain Description: Phage_int_SAM_5 Location: 4827-51 1 2 bp Feature: domain Description: INTN1_C_like Location: 5151-5625 bp Feature: domain Description: INTN1 _C_like Location: 51 51 -5625 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LRR_AMN1 (sd00034), RVT-DGRs, Arm-DNA-bind_5 (pfam17293), Phage_int_SAM_5 (pfam13102), INTN1_C_like (cd01185)

Seq: WDEI01000156.1 Bacteroides xylanisolvens strain BIOML-A63 scaffold156_size11209, whole genome shotgun sequence (11209 bp)
Overview 1 RT 1: 9008-11206 bp Neighborhood of RT #1 [9008, 11206] RVT-DGRs Feature: gene Location: 9008-9592 bp Feature: gene Location: 9574-9771 bp Feature: gene Location: 9737-10552 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 10070-10397 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 10070-10397 bp Feature: gene Location: 10836-11039 bp Feature: gene Location: 11069-11206 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: WDEI01000300.1 Bacteroides xylanisolvens strain BIOML-A63 scaffold300_size7065, whole genome shotgun sequence (7065 bp)
Overview 1 RT 1: 2225-7048 bp Neighborhood of RT #1 [2225, 7062] DUF3876 Bac_Flav_CT_G RVT_N RVT-GII GIIM Bac_Flav_CT_G Feature: gene Location: 2225-2539 bp Feature: domain Description: DUF3876 Location: 2279-2528 bp Feature: domain Description: DUF3 876 Location: 2279-2528 bp Feature: gene Location: 2554-4248 bp Feature: domain Description: Bac_Flav_CT_G Location: 2674-4240 bp Feature: domain Description: Bac_Flav_CT_G Location: 2674-4240 bp Feature: gene Location: 4245-5906 bp Feature: RT Description: RVT_N Location: 4299-4542 bp Feature: RT Description: RVT_N Location: 4299-4542 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4587-5235 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4587-523 5 bp Feature: domain Description: GIIM Note: maturase Location: 5289-5520 bp Feature: domain Description: GIIM Note: maturase Location: 5289-5520 bp Feature: gene Location: 5988-6368 bp Feature: gene Location: 6490-7062 bp Feature: domain Description: Bac_Flav_CT_G Location: 6496-7048 bp Feature: domain Description: Bac_Flav_CT_G Location: 6496-7048 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3876 (pfam12992), Bac_Flav_CT_G (TIGR03783), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: WDEI01000325.1 Bacteroides xylanisolvens strain BIOML-A63 scaffold325_size6638, whole genome shotgun sequence (6638 bp)
Overview 1 RT 1: 651-6287 bp Neighborhood of RT #1 [651, 6637] PDDEXK_2 RVT-Retrons DNA2 MTES_1575 DUF3320 Feature: gene Location: 651-1475 bp Feature: domain Description: PDDEXK_2 Location: 672-1350 bp Feature: domain Description: PDDEXK_2 Location: 672-1350 bp Feature: gene Location: 1644-3851 bp Feature: gene Location: 4059-5189 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4380-4923 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4 380-4 923 bp Feature: gene Location: 5240-6637 bp Feature: domain Description: DNA2 Location: 5243-5471 bp Feature: domain Description: DNA2 Location: 524 3-54 71 bp Feature: domain Description: MTES_1575 Location: 5537-5822 bp Feature: domain Description: MTES_1575 Location: 5537-5822 bp Feature: domain Description: DUF3320 Location: 6152-6287 bp Feature: domain Description: DUF3320 Location: 6152-6287 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, DNA2 (COG1112), MTES_1575 (pfam18741), DUF3320 (pfam11784), PDDEXK_2 (pfam12784)

Seq: WDEI01000491.1 Bacteroides xylanisolvens strain BIOML-A63 scaffold491_size3869, whole genome shotgun sequence (3869 bp)
Overview 1 RT 1: 2-3776 bp Neighborhood of RT #1 [2, 3805] Bac_Flav_CT_G Bac_Flav_CT_G RVT-GII Intron_maturas2 HNHc Feature: gene Location: 2-1447 bp Feature: domain Description: Bac_Flav_CT_G Location: 44-893 bp Feature: domain Description: Bac_Flav_CT_G Location: 44-893 bp Feature: domain Description: Bac_Flav_CT_G Location: 962-1433 bp Feature: domain Description: Bac_Flav_CT_G Location: 962-1433 bp Feature: gene Location: 1475-1648 bp Feature: gene Location: 1994-3805 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2258-3080 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 225 8-3080 bp Feature: domain Description: Intron_maturas2 Location: 3155-3470 bp Feature: domain Description: Intron_maturas2 Location: 315 5 -3470 bp Feature: domain Description: HNHc Note: nucleases Location: 3626-3776 bp Feature: domain Description: HNHc Note: nucleases Location: 3626-3776 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), Bac_Flav_CT_G (TIGR03783)

Seq: WDEI01000517.1 Bacteroides xylanisolvens strain BIOML-A63 scaffold517_size3578, whole genome shotgun sequence (3578 bp)
Overview 1 RT 1: 1-2694 bp Neighborhood of RT #1 [1, 2694] RVT-DGRs Feature: gene Location: 1-174 bp Feature: gene Location: 228-383 bp Feature: gene Location: 487-1791 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 703-1294 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 703-1294 bp Feature: gene Location: 1788-2273 bp Feature: gene Location: 2452-2694 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: WDEI01000529.1 Bacteroides xylanisolvens strain BIOML-A63 scaffold529_size3385, whole genome shotgun sequence (3385 bp)
Overview 1 RT 1: 30-2876 bp Neighborhood of RT #1 [30, 2908] RVT-GII Intron_maturas2 DUF1738 Feature: gene Location: 30-1841 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 294-1116 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 294-1116 bp Feature: domain Description: Intron_maturas2 Location: 1257-1497 bp Feature: domain Description: Intron_maturas2 Location: 1257 -1497 bp Feature: gene Location: 1972-2229 bp Feature: gene Location: 2405-2908 bp Feature: domain Description: DUF1738 Location: 2459-2876 bp Feature: domain Description: DUF17 38 Location: 2459-287 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1738 (pfam08401), RVT-GII, Intron_maturas2 (pfam01348)

Seq: WDEI01000626.1 Bacteroides xylanisolvens strain BIOML-A63 scaffold626_size2485, whole genome shotgun sequence (2485 bp)
Overview 1 RT 1: 563-2027 bp Neighborhood of RT #1 [563, 2371] RVT-GII Intron_maturas2 Feature: gene Location: 563-2371 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 827-1649 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8 27-1649 bp Feature: domain Description: Intron_maturas2 Location: 1718-2027 bp Feature: domain Description: Intron_maturas2 Location: 1718 -2027 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348)