myRT

myRT report for GCA_009102015.1_ASM910201v1

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Seq: WDEG01000001.1 Bacteroides xylanisolvens strain BIOML-A61 scaffold1_size321646, whole genome shotgun sequence (321646 bp)
Overview 1 RT 1: 69364-71395 bp Neighborhood of RT #1 [69364, 71395] RVT-DGRs Feature: gene Location: 69364-69567 bp Feature: gene Location: 69607-69789 bp Feature: gene Location: 69851-70666 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 70184-70511 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 701 84-7051 1 bp Feature: gene Location: 70632-70829 bp Feature: gene Location: 70811-71395 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: WDEG01000021.1 Bacteroides xylanisolvens strain BIOML-A61 scaffold21_size99102, whole genome shotgun sequence (99102 bp)
Overview 1 RT 1: 20209-24796 bp Neighborhood of RT #1 [20209, 24828] MPTase-PolyVal RVT-GII Intron_maturas2 DUF1738 Feature: gene Location: 20209-20580 bp Feature: gene Location: 20635-21936 bp Feature: domain Description: MPTase-PolyVal Location: 20890-21202 bp Feature: domain Description: MPTase-PolyVal Location: 2 0890-2 12 02 bp Feature: gene Location: 21950-23761 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22214-23036 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 2 2 14-2 3036 bp Feature: domain Description: Intron_maturas2 Location: 23177-23417 bp Feature: domain Description: Intron_maturas2 Location: 2 3177-2 3417 bp Feature: gene Location: 23892-24149 bp Feature: gene Location: 24325-24828 bp Feature: domain Description: DUF1738 Location: 24379-24796 bp Feature: domain Description: DUF1738 Location: 2 4379-2 4796 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MPTase-PolyVal (pfam18818), RVT-GII, Intron_maturas2 (pfam01348), DUF1738 (pfam08401)

Seq: WDEG01000023.1 Bacteroides xylanisolvens strain BIOML-A61 scaffold23_size92231, whole genome shotgun sequence (92231 bp)
Overview 1 RT 1: 14933-22874 bp Neighborhood of RT #1 [14933, 22888] SMC_prok_B Bac_Flav_CT_G RVT-GII Intron_maturas2 HNHc Bac_Flav_CT_G Bac_Flav_CT_G Feature: gene Location: 14933-17473 bp Feature: domain Description: SMC_prok_B Location: 16481-16793 bp Feature: domain Description: SMC_prok_B Location: 16481-16793 bp Feature: gene Location: 17694-18260 bp Feature: domain Description: Bac_Flav_CT_G Location: 17727-18147 bp Feature: domain Description: Bac_Flav_CT_G Location: 17727-18147 bp Feature: gene Location: 18317-20128 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18581-19403 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18581-19403 bp Feature: domain Description: Intron_maturas2 Location: 19478-19793 bp Feature: domain Description: Intron_maturas2 Location: 19478-19793 bp Feature: domain Description: HNHc Note: nucleases Location: 19949-20099 bp Feature: domain Description: HNHc Note: nucleases Location: 19949-20099 bp Feature: gene Location: 20474-20647 bp Feature: gene Location: 20675-22888 bp Feature: domain Description: Bac_Flav_CT_G Location: 20825-22334 bp Feature: domain Description: Bac_Flav_CT_G Location: 20825-223 3 4 bp Feature: domain Description: Bac_Flav_CT_G Location: 22406-22874 bp Feature: domain Description: Bac_Flav_CT_G Location: 22406-22874 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SMC_prok_B (TIGR02168), Bac_Flav_CT_G (TIGR03783), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: WDEG01000002.1 Bacteroides xylanisolvens strain BIOML-A61 scaffold2_size384316, whole genome shotgun sequence (384356 bp)
Overview 1 RT 1: 50333-59763 bp Neighborhood of RT #1 [50333, 59763] Laminin_G_3 Laminin_G_3 RVT-DGRs Feature: gene Location: 50333-57052 bp Feature: domain Description: Laminin_G_3 Location: 51776-51854 bp Feature: domain Description: Laminin_G_3 Location: 51776-51854 bp Feature: domain Description: Laminin_G_3 Location: 52505-52931 bp Feature: domain Description: Laminin_G_3 Location: 52505-52931 bp Feature: gene Location: 57297-57452 bp Feature: gene Location: 57490-58860 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 57772-58363 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 57772-58363 bp Feature: gene Location: 58857-59342 bp Feature: gene Location: 59521-59763 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-DGRs

Seq: WDEG01000033.1 Bacteroides xylanisolvens strain BIOML-A61 scaffold33_size65110, whole genome shotgun sequence (65110 bp)
Overview 1 RT 1: 51933-64334 bp Neighborhood of RT #1 [51933, 64459] rpsA DUF4011 DEXXQc_SF1 DEXXQc_SF1 TIGR00376 MTES_1575 DUF3320 RVT-Retrons PDDEXK_2 Feature: gene Location: 51933-53732 bp Feature: domain Description: rpsA Location: 52002-53601 bp Feature: domain Description: rpsA Location: 5 2002-5 3601 bp Feature: gene Location: 53829-59870 bp Feature: domain Description: DUF4011 Location: 55059-55572 bp Feature: domain Description: DUF4011 Location: 5 5 05 9-5 5 5 72 bp Feature: domain Description: DEXXQc_SF1 Location: 55911-56352 bp Feature: domain Description: DEXXQc_SF1 Location: 5 5 911-5 635 2 bp Feature: domain Description: DEXXQc_SF1 Location: 57348-58098 bp Feature: domain Description: DEXXQc_SF1 Location: 5 7348-5 8098 bp Feature: domain Description: TIGR00376 Location: 58227-58617 bp Feature: domain Description: TIGR00376 Location: 5 8227-5 8617 bp Feature: domain Description: MTES_1575 Location: 58770-59055 bp Feature: domain Description: MTES_15 75 Location: 5 8770-5 905 5 bp Feature: domain Description: DUF3320 Location: 59385-59520 bp Feature: domain Description: DUF3320 Location: 5 9385 -5 95 20 bp Feature: gene Location: 59921-61051 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 60242-60785 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 60242-60785 bp Feature: gene Location: 61259-63466 bp Feature: gene Location: 63635-64459 bp Feature: domain Description: PDDEXK_2 Location: 63656-64334 bp Feature: domain Description: PDDEXK_2 Location: 6365 6-64334 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rpsA (TIGR00717), DUF4011 (pfam13195), DEXXQc_SF1 (cd18043), TIGR00376 (DNA helicase, putative), MTES_1575 (pfam18741), DUF3320 (pfam11784), RVT-Retrons, PDDEXK_2 (pfam12784)

Seq: WDEG01000034.1 Bacteroides xylanisolvens strain BIOML-A61 scaffold34_size64490, whole genome shotgun sequence (64490 bp)
Overview 1 RT 1: 19362-27773 bp Neighborhood of RT #1 [19362, 29569] Arm-DNA-bind_5 Phage_int_SAM_5 INTN1_C_like RVT-DGRs Laminin_G_3 pfam08757 LRR_AMN1 Feature: gene Location: 19362-20507 bp Feature: domain Description: Arm-DNA-bind_5 Location: 19386-19632 bp Feature: domain Description: Arm-DNA-bind_5 Location: 19386 -196 32 bp Feature: domain Description: Phage_int_SAM_5 Location: 19671-19956 bp Feature: domain Description: Phage_int_SAM_5 Location: 196 71-19956 bp Feature: domain Description: INTN1_C_like Location: 19995-20469 bp Feature: domain Description: INTN1_C_like Location: 19995-2046 9 bp Feature: gene Location: 20557-21051 bp Feature: gene Location: 21053-22408 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 21329-21920 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 21329-21920 bp Feature: gene Location: 22553-22720 bp Feature: gene Location: 22781-29569 bp Feature: domain Description: Laminin_G_3 Location: 25217-25598 bp Feature: domain Description: Laminin_G_3 Location: 25217-25598 bp Feature: domain Description: pfam08757 Location: 26393-26717 bp Feature: domain Description: pfam08757 Location: 26 393-26 717 bp Feature: domain Description: LRR_AMN1 Location: 27329-27773 bp Feature: domain Description: LRR_AMN1 Location: 27329-27773 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Arm-DNA-bind_5 (pfam17293), Phage_int_SAM_5 (pfam13102), INTN1_C_like (cd01185), RVT-DGRs, Laminin_G_3 (pfam13385), pfam08757 (CotH;CotH kinase protein), LRR_AMN1 (sd00034)

Seq: WDEG01000069.1 Bacteroides xylanisolvens strain BIOML-A61 scaffold69_size20921, whole genome shotgun sequence (20921 bp)
Overview 1 RT 1: 8428-13620 bp Neighborhood of RT #1 [8428, 13631] Bac_Flav_CT_G RVT_N RVT-GII GIIM Bac_Flav_CT_G DUF3876 Feature: gene Location: 8428-9366 bp Feature: domain Description: Bac_Flav_CT_G Location: 8431-9352 bp Feature: domain Description: Bac_Flav_CT_G Location: 8431-9352 bp Feature: gene Location: 9545-9694 bp Feature: gene Location: 9950-11611 bp Feature: RT Description: RVT_N Location: 10004-10247 bp Feature: RT Description: RVT_N Location: 10004-10247 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10292-10940 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10292-10940 bp Feature: domain Description: GIIM Note: maturase Location: 10994-11225 bp Feature: domain Description: GIIM Note: maturase Location: 10994-11225 bp Feature: gene Location: 11608-13302 bp Feature: domain Description: Bac_Flav_CT_G Location: 11728-13294 bp Feature: domain Description: Bac_Flav_CT_G Location: 117 28-13294 bp Feature: gene Location: 13317-13631 bp Feature: domain Description: DUF3876 Location: 13371-13620 bp Feature: domain Description: DUF387 6 Location: 1337 1-13620 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Bac_Flav_CT_G (TIGR03783), DUF3876 (pfam12992), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: WDEG01000078.1 Bacteroides xylanisolvens strain BIOML-A61 scaffold78_size27218, whole genome shotgun sequence (27218 bp)
Overview 1 RT 1: 15138-19203 bp Neighborhood of RT #1 [15138, 19217] Phage_holin_6_1 Toprim_2 RVT-GII Intron_maturas2 zf-CHC2 Feature: gene Location: 15138-15533 bp Feature: domain Description: Phage_holin_6_1 Location: 15309-15504 bp Feature: domain Description: Phage_holin_6_1 Location: 15309-15504 bp Feature: gene Location: 15739-16578 bp Feature: domain Description: Toprim_2 Location: 16273-16525 bp Feature: domain Description: Toprim_2 Location: 16273-16525 bp Feature: gene Location: 16550-18358 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16814-17636 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 168 14-17636 bp Feature: domain Description: Intron_maturas2 Location: 17705-18014 bp Feature: domain Description: Intron_maturas2 Location: 17705-18 014 bp Feature: gene Location: 18647-18790 bp Feature: gene Location: 18906-19217 bp Feature: domain Description: zf-CHC2 Location: 19056-19203 bp Feature: domain Description: zf-CHC2 Location: 19056-19203 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_holin_6_1 (pfam09682), Toprim_2 (pfam13155), RVT-GII, Intron_maturas2 (pfam01348), zf-CHC2 (pfam01807)