myRT

myRT report for GCA_009102375.1_ASM910237v1

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Seq: WDDE01000011.1 Bacteroides xylanisolvens strain BIOML-A32 scaffold11_size49224, whole genome shotgun sequence (49224 bp)
Overview 1 RT 1: 14377-22665 bp Neighborhood of RT #1 [14377, 22665] DUF4141 Bac_Flav_CT_G RVT-GII Intron_maturas2 HNHc Bac_Flav_CT_G DUF4133 DUF4134 RVT_N RVT-GII GIIM Feature: gene Location: 14377-15009 bp Feature: domain Description: DUF4141 Location: 14401-14548 bp Feature: domain Description: DUF41 41 Location: 1 4401 -1 4548 bp Feature: gene Location: 15030-15488 bp Feature: domain Description: Bac_Flav_CT_G Location: 15048-15474 bp Feature: domain Description: Bac_Flav_CT_G Location: 1 5048-1 5474 bp Feature: gene Location: 15566-17377 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15830-16652 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 5830-1 6652 bp Feature: domain Description: Intron_maturas2 Location: 16727-17042 bp Feature: domain Description: Intron_maturas2 Location: 1 6727-1 7042 bp Feature: domain Description: HNHc Note: nucleases Location: 17198-17348 bp Feature: domain Description: HNHc Note: nucleases Location: 1 71 98-1 7348 bp Feature: gene Location: 17723-17896 bp Feature: gene Location: 17924-19753 bp Feature: domain Description: Bac_Flav_CT_G Location: 17927-19739 bp Feature: domain Description: Bac_Flav_CT_G Location: 1 7927-1 9739 bp Feature: gene Location: 19983-20333 bp Feature: domain Description: DUF4133 Location: 19998-20268 bp Feature: domain Description: DUF41 33 Location: 1 9998-20268 bp Feature: gene Location: 20345-20587 bp Feature: domain Description: DUF4134 Location: 20492-20582 bp Feature: domain Description: DUF41 34 Location: 20492-20582 bp Feature: gene Location: 20592-22241 bp Feature: domain Description: RVT_N Location: 20649-20892 bp Feature: domain Description: RVT_N Location: 20649-20892 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20937-21585 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20937-21 585 bp Feature: domain Description: GIIM Note: maturase Location: 21642-21873 bp Feature: domain Description: GIIM Note: maturase Location: 21 642-21 873 bp Feature: gene Location: 22345-22497 bp Feature: gene Location: 22510-22665 bp Sorry, your browser does not support inline SVG.
Associated domains:Seq: WDDE01000001.1 Bacteroides xylanisolvens strain BIOML-A32 scaffold1_size161399, whole genome shotgun sequence (161399 bp)
Overview 1 RT 1: 44912-48120 bp Neighborhood of RT #1 [44912, 48120] RVT-UG27 Feature: gene Location: 44912-45190 bp Feature: gene Location: 45220-45486 bp Feature: gene Location: 45536-46798 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 45728-46364 bp Feature: RT Description: RVT-UG2 7 Note: UG2 7 RT Location: 4572 8-46364 bp Feature: gene Location: 46791-47459 bp Feature: gene Location: 47473-48120 bp Sorry, your browser does not support inline SVG.
Associated domains:Seq: WDDE01000210.1 Bacteroides xylanisolvens strain BIOML-A32 scaffold210_size8107, whole genome shotgun sequence (8107 bp)
Overview 1 RT 1: 5874-7594 bp Neighborhood of RT #1 [5874, 8085] RVT-DGRs Feature: gene Location: 5874-6116 bp Feature: gene Location: 6302-6787 bp Feature: gene Location: 6784-8085 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 6997-7594 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 6997-7594 bp Sorry, your browser does not support inline SVG.
Associated domains:Seq: WDDE01000023.1 Bacteroides xylanisolvens strain BIOML-A32 scaffold23_size36137, whole genome shotgun sequence (36137 bp)
Overview 1 RT 1: 25671-35133 bp Neighborhood of RT #1 [25671, 35133] Laminin_G_3 Laminin_G_3 RVT-DGRs Feature: gene Location: 25671-32408 bp Feature: domain Description: Laminin_G_3 Location: 27132-27210 bp Feature: domain Description: Laminin_G_3 Location: 27132-27210 bp Feature: domain Description: Laminin_G_3 Location: 27861-28287 bp Feature: domain Description: Laminin_G_3 Location: 27861-28287 bp Feature: gene Location: 32653-32808 bp Feature: gene Location: 32925-34229 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 33138-33732 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 33138-33732 bp Feature: gene Location: 34226-34711 bp Feature: gene Location: 34891-35133 bp Sorry, your browser does not support inline SVG.
Associated domains:Seq: WDDE01000353.1 Bacteroides xylanisolvens strain BIOML-A32 scaffold353_size5744, whole genome shotgun sequence (5744 bp)
Overview 1 RT 1: 1844-4740 bp Neighborhood of RT #1 [1844, 4740] RVT-DGRs Feature: gene Location: 1844-2152 bp Feature: gene Location: 2174-2431 bp Feature: gene Location: 2507-3835 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2747-3344 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2747-3344 bp Feature: gene Location: 3832-4317 bp Feature: gene Location: 4498-4740 bp Sorry, your browser does not support inline SVG.
Associated domains:Seq: WDDE01000372.1 Bacteroides xylanisolvens strain BIOML-A32 scaffold372_size4709, whole genome shotgun sequence (4709 bp)
Overview 1 RT 1: 55-4356 bp Neighborhood of RT #1 [55, 4706] RVT-Retrons MTES_1575 DUF3320 Feature: gene Location: 55-2166 bp Feature: gene Location: 2374-3504 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2695-3238 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 26 95-3238 bp Feature: gene Location: 3555-4706 bp Feature: domain Description: MTES_1575 Location: 3606-3891 bp Feature: domain Description: MTES_1575 Location: 36 06 -3891 bp Feature: domain Description: DUF3320 Location: 4221-4356 bp Feature: domain Description: DUF3320 Location: 4221-4356 bp Sorry, your browser does not support inline SVG.
Associated domains:Seq: WDDE01000050.1 Bacteroides xylanisolvens strain BIOML-A32 scaffold50_size21909, whole genome shotgun sequence (21909 bp)
Overview 1 RT 1: 29-2343 bp Neighborhood of RT #1 [29, 2372] RVT-DGRs Avd_like DUF1566 Feature: gene Location: 29-994 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 404-947 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 404-947 bp Feature: gene Location: 1009-1416 bp Feature: domain Description: Avd_like Location: 1042-1351 bp Feature: domain Description: Avd_like Location: 1042-1351 bp Feature: gene Location: 1563-2372 bp Feature: domain Description: DUF1566 Location: 2094-2343 bp Feature: domain Description: DUF1566 Location: 2094-2343 bp Sorry, your browser does not support inline SVG.
Associated domains:Seq: WDDE01000052.1 Bacteroides xylanisolvens strain BIOML-A32 scaffold52_size21780, whole genome shotgun sequence (21750 bp)
Overview 1 RT 1: 14093-18042 bp Neighborhood of RT #1 [14093, 18042] RVT-DGRs Feature: gene Location: 14093-14383 bp Feature: gene Location: 14393-15754 bp Feature: gene Location: 16087-17274 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 16420-17047 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 16420-17047 bp Feature: gene Location: 17237-17665 bp Feature: gene Location: 17662-18042 bp Sorry, your browser does not support inline SVG.
Associated domains:Seq: WDDE01000586.1 Bacteroides xylanisolvens strain BIOML-A32 scaffold586_size4131, whole genome shotgun sequence (4035 bp)
Overview 1 RT 1: 128-4034 bp Neighborhood of RT #1 [128, 4034] Bac_Flav_CT_J RVT-GII Intron_maturas2 HNHc Feature: gene Location: 128-1132 bp Feature: domain Description: Bac_Flav_CT_J Location: 134-1103 bp Feature: domain Description: Bac_Flav_CT_J Location: 134-1103 bp Feature: gene Location: 1137-1673 bp Feature: gene Location: 1666-3501 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1960-2782 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19 60-2782 bp Feature: domain Description: Intron_maturas2 Location: 2941-3310 bp Feature: domain Description: Intron_maturas2 Location: 29 41-3310 bp Feature: domain Description: HNHc Note: nucleases Location: 3334-3475 bp Feature: domain Description: HNHc Note: nucleases Location: 3334-3475 bp Feature: gene Location: 3903-4034 bp Sorry, your browser does not support inline SVG.
Associated domains:Seq: WDDE01000006.1 Bacteroides xylanisolvens strain BIOML-A32 scaffold6_size60395, whole genome shotgun sequence (60395 bp)
Overview 1 RT 1: 47151-50914 bp Neighborhood of RT #1 [47151, 50985] RVT-DGRs Phage_holin_4_1 Feature: gene Location: 47151-48485 bp Feature: gene Location: 48529-48873 bp Feature: gene Location: 49130-50164 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 49340-49952 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 49340-49952 bp Feature: gene Location: 50142-50513 bp Feature: gene Location: 50515-50985 bp Feature: domain Description: Phage_holin_4_1 Location: 50602-50914 bp Feature: domain Description: Phage_holin_4_1 Location: 50602-50914 bp Sorry, your browser does not support inline SVG.
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