myRT

myRT report for GCA_009102455.1_ASM910245v1

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Seq: WDDA01001139.1 Bacteroides xylanisolvens strain BIOML-A27 scaffold1139_size1341, whole genome shotgun sequence (1341 bp)
Overview 1 RT 1: 23-833 bp Neighborhood of RT #1 [23, 1324] RVT-DGRs Feature: gene Location: 23-1324 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 236-833 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 236-833 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: WDDA01000011.1 Bacteroides xylanisolvens strain BIOML-A27 scaffold11_size35104, whole genome shotgun sequence (35104 bp)
Overview 1 RT 1: 24009-33471 bp Neighborhood of RT #1 [24009, 33471] Laminin_G_3 Laminin_G_3 RVT-DGRs Feature: gene Location: 24009-30746 bp Feature: domain Description: Laminin_G_3 Location: 25470-25548 bp Feature: domain Description: Laminin_G_3 Location: 2 5470-2 5548 bp Feature: domain Description: Laminin_G_3 Location: 26199-26625 bp Feature: domain Description: Laminin_G_3 Location: 2 6199-2 662 5 bp Feature: gene Location: 30991-31146 bp Feature: gene Location: 31263-32567 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 31476-32070 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 31476-32 070 bp Feature: gene Location: 32564-33049 bp Feature: gene Location: 33229-33471 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-DGRs

Seq: WDDA01000001.1 Bacteroides xylanisolvens strain BIOML-A27 scaffold1_size148275, whole genome shotgun sequence (148275 bp)
Overview 1 RT 1: 112441-116374 bp Neighborhood of RT #1 [112441, 116374] RVT-UG27 Feature: gene Location: 112441-113088 bp Feature: gene Location: 113102-113770 bp Feature: gene Location: 113763-115025 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 113955-114591 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 113 955-114591 bp Feature: gene Location: 115348-115845 bp Feature: gene Location: 115895-116374 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG27

Seq: WDDA01000040.1 Bacteroides xylanisolvens strain BIOML-A27 scaffold40_size17532, whole genome shotgun sequence (17532 bp)
Overview 1 RT 1: 28-2342 bp Neighborhood of RT #1 [28, 2371] RVT-DGRs Avd_like DUF1566 Feature: gene Location: 28-993 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 403-946 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 4 03-94 6 bp Feature: gene Location: 1008-1415 bp Feature: domain Description: Avd_like Location: 1041-1350 bp Feature: domain Description: Avd_like Location: 104 1-1350 bp Feature: gene Location: 1562-2371 bp Feature: domain Description: DUF1566 Location: 2093-2342 bp Feature: domain Description: DUF1566 Location: 2093-234 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Avd_like (cd16376), DUF1566 (pfam07603)

Seq: WDDA01000495.1 Bacteroides xylanisolvens strain BIOML-A27 scaffold495_size2484, whole genome shotgun sequence (2484 bp)
Overview 1 RT 1: 114-2482 bp Neighborhood of RT #1 [114, 2482] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 114-1949 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 408-1230 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 408-1230 bp Feature: domain Description: Intron_maturas2 Location: 1389-1758 bp Feature: domain Description: Intron_maturas2 Location: 1389-175 8 bp Feature: domain Description: HNHc Note: nucleases Location: 1782-1923 bp Feature: domain Description: HNHc Note: nucleases Location: 1782-1923 bp Feature: gene Location: 2351-2482 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: WDDA01000005.1 Bacteroides xylanisolvens strain BIOML-A27 scaffold5_size53947, whole genome shotgun sequence (53947 bp)
Overview 1 RT 1: 43810-47573 bp Neighborhood of RT #1 [43810, 47644] RVT-DGRs Phage_holin_4_1 Feature: gene Location: 43810-45144 bp Feature: gene Location: 45188-45532 bp Feature: gene Location: 45789-46823 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 45999-46611 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 45999-46 6 11 bp Feature: gene Location: 46801-47172 bp Feature: gene Location: 47174-47644 bp Feature: domain Description: Phage_holin_4_1 Location: 47261-47573 bp Feature: domain Description: Phage_holin_4_1 Location: 4726 1-47573 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Phage_holin_4_1 (pfam05105)

Seq: WDDA01000064.1 Bacteroides xylanisolvens strain BIOML-A27 scaffold64_size23791, whole genome shotgun sequence (23791 bp)
Overview 1 RT 1: 1634-4530 bp Neighborhood of RT #1 [1634, 4530] RVT-DGRs Feature: gene Location: 1634-1876 bp Feature: gene Location: 2057-2542 bp Feature: gene Location: 2539-3867 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2779-3376 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 27 7 9-337 6 bp Feature: gene Location: 3943-4200 bp Feature: gene Location: 4222-4530 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: WDDA01000069.1 Bacteroides xylanisolvens strain BIOML-A27 scaffold69_size11443, whole genome shotgun sequence (11443 bp)
Overview 1 RT 1: 4314-7963 bp Neighborhood of RT #1 [4314, 7963] RVT-DGRs Feature: gene Location: 4314-4694 bp Feature: gene Location: 4691-5119 bp Feature: gene Location: 5082-6269 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 5415-6042 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 5415-6042 bp Feature: gene Location: 6391-6528 bp Feature: gene Location: 6602-7963 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: WDDA01000007.1 Bacteroides xylanisolvens strain BIOML-A27 scaffold7_size47111, whole genome shotgun sequence (47111 bp)
Overview 1 RT 1: 14436-22774 bp Neighborhood of RT #1 [14436, 22774] DUF4141 Bac_Flav_CT_G RVT-GII Intron_maturas2 HNHc Bac_Flav_CT_G DUF4133 DUF4134 RVT_N RVT-GII GIIM Feature: gene Location: 14436-15068 bp Feature: domain Description: DUF4141 Location: 14460-14607 bp Feature: domain Description: DUF4141 Location: 14460-14607 bp Feature: gene Location: 15089-15568 bp Feature: domain Description: Bac_Flav_CT_G Location: 15122-15554 bp Feature: domain Description: Bac_Flav_CT_G Location: 15122-15554 bp Feature: gene Location: 15625-17436 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15889-16711 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15889 -16711 bp Feature: domain Description: Intron_maturas2 Location: 16786-17101 bp Feature: domain Description: Intron_maturas2 Location: 16786-17101 bp Feature: domain Description: HNHc Note: nucleases Location: 17257-17407 bp Feature: domain Description: HNHc Note: nucleases Location: 17257-17407 bp Feature: gene Location: 17782-17955 bp Feature: gene Location: 17983-19812 bp Feature: domain Description: Bac_Flav_CT_G Location: 17986-19798 bp Feature: domain Description: Bac_Flav_CT_G Location: 179 86-19 79 8 bp Feature: gene Location: 20042-20392 bp Feature: domain Description: DUF4133 Location: 20057-20327 bp Feature: domain Description: DUF4133 Location: 20057-20327 bp Feature: gene Location: 20404-20646 bp Feature: domain Description: DUF4134 Location: 20551-20641 bp Feature: domain Description: DUF4134 Location: 20551-20641 bp Feature: gene Location: 20651-22300 bp Feature: domain Description: RVT_N Location: 20708-20951 bp Feature: domain Description: RVT_N Location: 20708-209 51 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20996-21644 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 209 9 6-21644 bp Feature: domain Description: GIIM Note: maturase Location: 21701-21932 bp Feature: domain Description: GIIM Note: maturase Location: 21701-219 32 bp Feature: gene Location: 22404-22556 bp Feature: gene Location: 22580-22774 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4141 (pfam13605), Bac_Flav_CT_G (TIGR03783), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), DUF4133 (pfam13571), DUF4134 (pfam13572), RVT_N (pfam13655), GIIM (pfam08388)