myRT

myRT report for GCA_009102465.1_ASM910246v1

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Seq: WDCZ01000102.1 Bacteroides xylanisolvens strain BIOML-A26 scaffold102_size17609, whole genome shotgun sequence (17609 bp)
Overview 1 RT 1: 654-13049 bp Neighborhood of RT #1 [654, 13180] PDDEXK_2 RVT-Retrons DUF4011 DEXXQc_SF1 DEXXQc_SF1 TIGR00376 MTES_1575 DUF3320 rpsA Feature: gene Location: 654-1478 bp Feature: domain Description: PDDEXK_2 Location: 675-1353 bp Feature: domain Description: PDDEXK_2 Location: 675-1 353 bp Feature: gene Location: 1647-3854 bp Feature: gene Location: 4062-5192 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4383-4926 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4383-4926 bp Feature: gene Location: 5243-11284 bp Feature: domain Description: DUF4011 Location: 6473-6986 bp Feature: domain Description: DUF401 1 Location: 6473-6986 bp Feature: domain Description: DEXXQc_SF1 Location: 7325-7754 bp Feature: domain Description: DEXXQc_SF1 Location: 7325-7754 bp Feature: domain Description: DEXXQc_SF1 Location: 8753-9512 bp Feature: domain Description: DEXXQc_SF1 Location: 8753-951 2 bp Feature: domain Description: TIGR00376 Location: 9641-10031 bp Feature: domain Description: TIGR00376 Location: 9641 -1 0031 bp Feature: domain Description: MTES_1575 Location: 10184-10469 bp Feature: domain Description: MTES_1 575 Location: 1 01 84-1 0469 bp Feature: domain Description: DUF3320 Location: 10799-10934 bp Feature: domain Description: DUF3320 Location: 1 0799-1 0934 bp Feature: gene Location: 11381-13180 bp Feature: domain Description: rpsA Location: 11450-13049 bp Feature: domain Description: rpsA Location: 1 1 450-1 3049 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PDDEXK_2 (pfam12784), RVT-Retrons, DUF4011 (pfam13195), DEXXQc_SF1 (cd18043), TIGR00376 (DNA helicase, putative), MTES_1575 (pfam18741), DUF3320 (pfam11784), rpsA (TIGR00717)

Seq: WDCZ01000163.1 Bacteroides xylanisolvens strain BIOML-A26 scaffold163_size5518, whole genome shotgun sequence (5518 bp)
Overview 1 RT 1: 989-3885 bp Neighborhood of RT #1 [989, 3885] RVT-DGRs Feature: gene Location: 989-1297 bp Feature: gene Location: 1319-1576 bp Feature: gene Location: 1652-2980 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1892-2489 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1892 -2 489 bp Feature: gene Location: 2977-3462 bp Feature: gene Location: 3643-3885 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: WDCZ01000187.1 Bacteroides xylanisolvens strain BIOML-A26 scaffold187_size2483, whole genome shotgun sequence (2483 bp)
Overview 1 RT 1: 114-2482 bp Neighborhood of RT #1 [114, 2482] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 114-1949 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 408-1230 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 408-123 0 bp Feature: domain Description: Intron_maturas2 Location: 1389-1758 bp Feature: domain Description: Intron_maturas2 Location: 13 89-1758 bp Feature: domain Description: HNHc Note: nucleases Location: 1782-1923 bp Feature: domain Description: HNHc Note: nucleases Location: 1782-1923 bp Feature: gene Location: 2351-2482 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: WDCZ01000028.1 Bacteroides xylanisolvens strain BIOML-A26 scaffold28_size62557, whole genome shotgun sequence (62557 bp)
Overview 1 RT 1: 60186-62482 bp Neighborhood of RT #1 [60186, 62529] DUF1566 Avd_like RVT-DGRs Feature: gene Location: 60186-60995 bp Feature: domain Description: DUF1566 Location: 60717-60966 bp Feature: domain Description: DUF1566 Location: 60717-60966 bp Feature: gene Location: 61142-61549 bp Feature: domain Description: Avd_like Location: 61175-61484 bp Feature: domain Description: Avd_like Location: 61175-614 84 bp Feature: gene Location: 61564-62529 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 61939-62482 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 61939-624 82 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1566 (pfam07603), Avd_like (cd16376), RVT-DGRs

Seq: WDCZ01000002.1 Bacteroides xylanisolvens strain BIOML-A26 scaffold2_size198713, whole genome shotgun sequence (198713 bp)
Overview 1 RT 1: 58839-62047 bp Neighborhood of RT #1 [58839, 62047] RVT-UG27 Feature: gene Location: 58839-59117 bp Feature: gene Location: 59147-59413 bp Feature: gene Location: 59463-60725 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 59655-60291 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 5 965 5 -60291 bp Feature: gene Location: 60718-61386 bp Feature: gene Location: 61400-62047 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG27

Seq: WDCZ01000034.1 Bacteroides xylanisolvens strain BIOML-A26 scaffold34_size56455, whole genome shotgun sequence (56455 bp)
Overview 1 RT 1: 14436-22724 bp Neighborhood of RT #1 [14436, 22724] DUF4141 Bac_Flav_CT_G RVT-GII Intron_maturas2 HNHc Bac_Flav_CT_G DUF4133 DUF4134 RVT_N RVT-GII GIIM Feature: gene Location: 14436-15068 bp Feature: domain Description: DUF4141 Location: 14460-14607 bp Feature: domain Description: DUF4141 Location: 1446 0-146 07 bp Feature: gene Location: 15089-15547 bp Feature: domain Description: Bac_Flav_CT_G Location: 15107-15533 bp Feature: domain Description: Bac_Flav_CT_G Location: 15107-15533 bp Feature: gene Location: 15625-17436 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15889-16711 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15889-16 711 bp Feature: domain Description: Intron_maturas2 Location: 16786-17101 bp Feature: domain Description: Intron_maturas2 Location: 16 786 -17101 bp Feature: domain Description: HNHc Note: nucleases Location: 17257-17407 bp Feature: domain Description: HNHc Note: nucleases Location: 17257-17407 bp Feature: gene Location: 17782-17955 bp Feature: gene Location: 17983-19812 bp Feature: domain Description: Bac_Flav_CT_G Location: 17986-19798 bp Feature: domain Description: Bac_Flav_CT_G Location: 17986 -19798 bp Feature: gene Location: 20042-20392 bp Feature: domain Description: DUF4133 Location: 20057-20327 bp Feature: domain Description: DUF4133 Location: 20057-20327 bp Feature: gene Location: 20404-20646 bp Feature: domain Description: DUF4134 Location: 20551-20641 bp Feature: domain Description: DUF4134 Location: 20551-206 41 bp Feature: gene Location: 20651-22300 bp Feature: domain Description: RVT_N Location: 20708-20951 bp Feature: domain Description: RVT_N Location: 20708-20951 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20996-21644 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20996 -216 44 bp Feature: domain Description: GIIM Note: maturase Location: 21701-21932 bp Feature: domain Description: GIIM Note: maturase Location: 21701-21932 bp Feature: gene Location: 22404-22556 bp Feature: gene Location: 22569-22724 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4141 (pfam13605), Bac_Flav_CT_G (TIGR03783), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), DUF4133 (pfam13571), DUF4134 (pfam13572), RVT_N (pfam13655), GIIM (pfam08388)

Seq: WDCZ01000003.1 Bacteroides xylanisolvens strain BIOML-A26 scaffold3_size180979, whole genome shotgun sequence (180979 bp)
Overview 1 RT 1: 162807-166756 bp Neighborhood of RT #1 [162807, 166756] RVT-DGRs Feature: gene Location: 162807-163097 bp Feature: gene Location: 163107-164468 bp Feature: gene Location: 164801-165988 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 165134-165761 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 165134-1657 61 bp Feature: gene Location: 165951-166379 bp Feature: gene Location: 166376-166756 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: WDCZ01000004.1 Bacteroides xylanisolvens strain BIOML-A26 scaffold4_size167452, whole genome shotgun sequence (167452 bp)
Overview 1 RT 1: 113238-117072 bp Neighborhood of RT #1 [113238, 117072] Phage_holin_4_1 RVT-DGRs Feature: gene Location: 113238-113708 bp Feature: domain Description: Phage_holin_4_1 Location: 113325-113637 bp Feature: domain Description: Phage_holin_4_1 Location: 113325-113637 bp Feature: gene Location: 113710-114081 bp Feature: gene Location: 114059-115093 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 114269-114881 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 114269-1148 8 1 bp Feature: gene Location: 115350-115694 bp Feature: gene Location: 115738-117072 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_holin_4_1 (pfam05105), RVT-DGRs

Seq: WDCZ01000060.1 Bacteroides xylanisolvens strain BIOML-A26 scaffold60_size34867, whole genome shotgun sequence (34867 bp)
Overview 1 RT 1: 23772-33234 bp Neighborhood of RT #1 [23772, 33234] Laminin_G_3 Laminin_G_3 RVT-DGRs Feature: gene Location: 23772-30509 bp Feature: domain Description: Laminin_G_3 Location: 25233-25311 bp Feature: domain Description: Laminin_G_3 Location: 25233-25311 bp Feature: domain Description: Laminin_G_3 Location: 25962-26388 bp Feature: domain Description: Laminin_G_3 Location: 259 62-26388 bp Feature: gene Location: 30754-30909 bp Feature: gene Location: 31026-32330 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 31239-31833 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 31239 -31833 bp Feature: gene Location: 32327-32812 bp Feature: gene Location: 32992-33234 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-DGRs

Seq: WDCZ01000066.1 Bacteroides xylanisolvens strain BIOML-A26 scaffold66_size30749, whole genome shotgun sequence (30749 bp)
Overview 1 RT 1: 1-1966 bp Neighborhood of RT #1 [1, 1966] RVT-DGRs Feature: gene Location: 1-1056 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 4-565 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 4-565 bp Feature: gene Location: 1053-1538 bp Feature: gene Location: 1724-1966 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: WDCZ01000096.1 Bacteroides xylanisolvens strain BIOML-A26 scaffold96_size20232, whole genome shotgun sequence (20232 bp)
Overview 1 RT 1: 1-1984 bp Neighborhood of RT #1 [1, 1984] RVT-DGRs Feature: gene Location: 1-1056 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 4-565 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 4-565 bp Feature: gene Location: 1053-1538 bp Feature: gene Location: 1742-1984 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs