myRT

myRT report for GCA_009102575.1_ASM910257v1

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Seq: WDCU01000013.1 Bacteroides xylanisolvens strain BIOML-A21 scaffold13_size45809, whole genome shotgun sequence (45809 bp)
Overview 1 RT 1: 23772-33234 bp Neighborhood of RT #1 [23772, 33234] Laminin_G_3 Laminin_G_3 RVT-DGRs Feature: gene Location: 23772-30509 bp Feature: domain Description: Laminin_G_3 Location: 25233-25311 bp Feature: domain Description: Laminin_G_3 Location: 25233-2531 1 bp Feature: domain Description: Laminin_G_3 Location: 25962-26388 bp Feature: domain Description: Laminin_G_3 Location: 25962-26388 bp Feature: gene Location: 30754-30909 bp Feature: gene Location: 31026-32330 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 31239-31833 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 31 239-31 833 bp Feature: gene Location: 32327-32812 bp Feature: gene Location: 32992-33234 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-DGRs

Seq: WDCU01000014.1 Bacteroides xylanisolvens strain BIOML-A21 scaffold14_size44517, whole genome shotgun sequence (44517 bp)
Overview 1 RT 1: 24550-28384 bp Neighborhood of RT #1 [24550, 28384] Phage_holin_4_1 RVT-DGRs Feature: gene Location: 24550-25020 bp Feature: domain Description: Phage_holin_4_1 Location: 24637-24949 bp Feature: domain Description: Phage_holin_4_1 Location: 2 4637-2 4949 bp Feature: gene Location: 25022-25393 bp Feature: gene Location: 25371-26405 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 25581-26193 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2 5581-2 6193 bp Feature: gene Location: 26662-27006 bp Feature: gene Location: 27050-28384 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_holin_4_1 (pfam05105), RVT-DGRs

Seq: WDCU01000017.1 Bacteroides xylanisolvens strain BIOML-A21 scaffold17_size38521, whole genome shotgun sequence (38521 bp)
Overview 1 RT 1: 2108-4790 bp Neighborhood of RT #1 [2108, 4790] DUF4133 DUF4134 RVT_N RVT-GII GIIM Feature: gene Location: 2108-2458 bp Feature: domain Description: DUF4133 Location: 2123-2393 bp Feature: domain Description: DUF413 3 Location: 2123 -23 93 bp Feature: gene Location: 2470-2712 bp Feature: domain Description: DUF4134 Location: 2617-2707 bp Feature: domain Description: DUF413 4 Location: 2617-2707 bp Feature: gene Location: 2717-4366 bp Feature: domain Description: RVT_N Location: 2774-3017 bp Feature: domain Description: RVT_N Location: 2774-3 017 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3062-3710 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 062-3 710 bp Feature: domain Description: GIIM Note: maturase Location: 3767-3998 bp Feature: domain Description: GIIM Note: maturase Location: 3 767-3 998 bp Feature: gene Location: 4470-4622 bp Feature: gene Location: 4635-4790 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4133 (pfam13571), DUF4134 (pfam13572), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: WDCU01000001.1 Bacteroides xylanisolvens strain BIOML-A21 scaffold1_size176820, whole genome shotgun sequence (176820 bp)
Overview 1 RT 1: 41030-44238 bp Neighborhood of RT #1 [41030, 44238] RVT-UG27 Feature: gene Location: 41030-41308 bp Feature: gene Location: 41338-41604 bp Feature: gene Location: 41654-42916 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 41846-42482 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 4 184 6-4 24 82 bp Feature: gene Location: 42909-43577 bp Feature: gene Location: 43591-44238 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG27

Seq: WDCU01000026.1 Bacteroides xylanisolvens strain BIOML-A21 scaffold26_size35726, whole genome shotgun sequence (35726 bp)
Overview 1 RT 1: 5313-8962 bp Neighborhood of RT #1 [5313, 8962] RVT-DGRs Feature: gene Location: 5313-5693 bp Feature: gene Location: 5690-6118 bp Feature: gene Location: 6081-7268 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 6414-7041 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 6414-7041 bp Feature: gene Location: 7390-7527 bp Feature: gene Location: 7601-8962 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: WDCU01000423.1 Bacteroides xylanisolvens strain BIOML-A21 scaffold423_size3178, whole genome shotgun sequence (3178 bp)
Overview 1 RT 1: 1-3129 bp Neighborhood of RT #1 [1, 3129] RVT-Retrons Feature: gene Location: 1-732 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 322-733 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 322-733 bp Feature: gene Location: 940-3129 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons

Seq: WDCU01000503.1 Bacteroides xylanisolvens strain BIOML-A21 scaffold503_size2496, whole genome shotgun sequence (2496 bp)
Overview 1 RT 1: 110-2440 bp Neighborhood of RT #1 [110, 2440] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 110-1921 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 374-1196 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37 4-1196 bp Feature: domain Description: Intron_maturas2 Location: 1271-1586 bp Feature: domain Description: Intron_maturas2 Location: 127 1-1586 bp Feature: domain Description: HNHc Note: nucleases Location: 1742-1892 bp Feature: domain Description: HNHc Note: nucleases Location: 17 42-1892 bp Feature: gene Location: 2267-2440 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: WDCU01000506.1 Bacteroides xylanisolvens strain BIOML-A21 scaffold506_size2483, whole genome shotgun sequence (2483 bp)
Overview 1 RT 1: 2-2344 bp Neighborhood of RT #1 [2, 2370] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 2-133 bp Feature: gene Location: 535-2370 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 829-1651 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8 29-1651 bp Feature: domain Description: Intron_maturas2 Location: 1810-2179 bp Feature: domain Description: Intron_maturas2 Location: 18 10-2179 bp Feature: domain Description: HNHc Note: nucleases Location: 2203-2344 bp Feature: domain Description: HNHc Note: nucleases Location: 2203-2344 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: WDCU01000610.1 Bacteroides xylanisolvens strain BIOML-A21 scaffold610_size1749, whole genome shotgun sequence (1749 bp)
Overview 1 RT 1: 1-1596 bp Neighborhood of RT #1 [1, 1596] RVT-DGRs Feature: gene Location: 1-981 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 214-811 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 214-811 bp Feature: gene Location: 1084-1341 bp Feature: gene Location: 1363-1596 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: WDCU01000008.1 Bacteroides xylanisolvens strain BIOML-A21 scaffold8_size58792, whole genome shotgun sequence (58792 bp)
Overview 1 RT 1: 56421-58717 bp Neighborhood of RT #1 [56421, 58764] DUF1566 Avd_like RVT-DGRs Feature: gene Location: 56421-57230 bp Feature: domain Description: DUF1566 Location: 56952-57201 bp Feature: domain Description: DUF1566 Location: 56952-57201 bp Feature: gene Location: 57377-57784 bp Feature: domain Description: Avd_like Location: 57410-57719 bp Feature: domain Description: Avd_like Location: 57410 -57719 bp Feature: gene Location: 57799-58764 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 58174-58717 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 58174-58717 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1566 (pfam07603), Avd_like (cd16376), RVT-DGRs