myRT

myRT report for GCA_009102585.1_ASM910258v1

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Seq: WDCO01001027.1 Bacteroides xylanisolvens strain BIOML-A15 scaffold1027_size1422, whole genome shotgun sequence (1422 bp)
Overview 1 RT 1: 3-1376 bp Neighborhood of RT #1 [3, 1420] RVT-Retrons Phage_int_SAM_5 INTN1_C_like Feature: gene Location: 3-512 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 204-513 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 204-51 3 bp Feature: gene Location: 788-1420 bp Feature: domain Description: Phage_int_SAM_5 Location: 821-1064 bp Feature: domain Description: Phage_int_SAM_5 Location: 821 -1 064 bp Feature: domain Description: INTN1_C_like Location: 1145-1376 bp Feature: domain Description: INTN1 _C_like Location: 1 1 45-1 376 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, Phage_int_SAM_5 (pfam13102), INTN1_C_like (cd01185)

Seq: WDCO01001045.1 Bacteroides xylanisolvens strain BIOML-A15 scaffold1045_size1384, whole genome shotgun sequence (1384 bp)
Overview 1 RT 1: 1-1345 bp Neighborhood of RT #1 [1, 1345] RVT-DGRs Feature: gene Location: 1-969 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 277-868 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2 77-868 bp Feature: gene Location: 1139-1345 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: WDCO01000176.1 Bacteroides xylanisolvens strain BIOML-A15 scaffold176_size8078, whole genome shotgun sequence (8078 bp)
Overview 1 RT 1: 2-7163 bp Neighborhood of RT #1 [2, 7222] RVT-GII RVT-GII GIIM Pgu1 Pgu1 RGL11 Feature: gene Location: 2-1003 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 212-869 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 212-869 bp Feature: gene Location: 1577-2983 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1919-2537 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1919-253 7 bp Feature: domain Description: GIIM Note: maturase Location: 2594-2813 bp Feature: domain Description: GIIM Note: maturase Location: 2594-2813 bp Feature: gene Location: 3637-5100 bp Feature: domain Description: Pgu1 Location: 3772-4126 bp Feature: domain Description: Pgu1 Location: 3 772-4126 bp Feature: domain Description: Pgu1 Location: 4216-4711 bp Feature: domain Description: Pgu1 Location: 4216-4711 bp Feature: gene Location: 5282-7222 bp Feature: domain Description: RGL11 Location: 5423-7163 bp Feature: domain Description: RGL11 Location: 5423 -7163 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), Pgu1 (COG5434), RGL11 (cl22850)

Seq: WDCO01000205.1 Bacteroides xylanisolvens strain BIOML-A15 scaffold205_size7138, whole genome shotgun sequence (7138 bp)
Overview 1 RT 1: 2607-4630 bp Neighborhood of RT #1 [2607, 4665] DDE_Tnp_IS66_C group_II_RT_mat RVT-GII Translocase_SecB Feature: gene Location: 2607-2807 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 2619-2721 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 2619-2721 bp Feature: gene Location: 2903-3205 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 2951-3188 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 2951-3188 bp Feature: gene Location: 3262-3582 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3265-3502 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3265-3502 bp Feature: gene Location: 3987-4220 bp Feature: gene Location: 4249-4665 bp Feature: domain Description: Translocase_SecB Location: 4306-4630 bp Feature: domain Description: Translocase_SecB Location: 4 306-4 630 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS66_C (pfam13817), group_II_RT_mat (TIGR04416), RVT-GII, Translocase_SecB (cl00251)

Seq: WDCO01000218.1 Bacteroides xylanisolvens strain BIOML-A15 scaffold218_size6929, whole genome shotgun sequence (6929 bp)
Overview 1 RT 1: 2259-5317 bp Neighborhood of RT #1 [2259, 5394] DUF4134 RVT-GII Intron_maturas2 HNHc DUF4134 DUF4133 Feature: gene Location: 2259-2513 bp Feature: domain Description: DUF4134 Location: 2295-2496 bp Feature: domain Description: DUF4134 Location: 2295 -2496 bp Feature: gene Location: 2525-2875 bp Feature: gene Location: 3055-4866 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3319-4141 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3319-4141 bp Feature: domain Description: Intron_maturas2 Location: 4330-4540 bp Feature: domain Description: Intron_maturas2 Location: 4330-45 40 bp Feature: domain Description: HNHc Note: nucleases Location: 4690-4795 bp Feature: domain Description: HNHc Note: nucleases Location: 4690-4795 bp Feature: gene Location: 4891-5085 bp Feature: domain Description: DUF4134 Location: 4981-5071 bp Feature: domain Description: DUF4134 Location: 4981-5 071 bp Feature: gene Location: 5098-5394 bp Feature: domain Description: DUF4133 Location: 5140-5317 bp Feature: domain Description: DUF4133 Location: 5 140-5 317 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4134 (pfam13572), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), DUF4133 (pfam13571)

Seq: WDCO01000230.1 Bacteroides xylanisolvens strain BIOML-A15 scaffold230_size6720, whole genome shotgun sequence (6720 bp)
Overview 1 RT 1: 345-4260 bp Neighborhood of RT #1 [345, 4451] RVT-GII Intron_maturas2 SusD Feature: gene Location: 345-2156 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 609-1428 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6 09-1428 bp Feature: domain Description: Intron_maturas2 Location: 1584-1860 bp Feature: domain Description: Intron_maturas2 Location: 1584-186 0 bp Feature: gene Location: 2169-2666 bp Feature: gene Location: 2817-4451 bp Feature: domain Description: SusD Location: 3165-4260 bp Feature: domain Description: SusD Location: 316 5-426 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), SusD (NF033071)

Seq: WDCO01000316.1 Bacteroides xylanisolvens strain BIOML-A15 scaffold316_size5336, whole genome shotgun sequence (5336 bp)
Overview 1 RT 1: 1-4433 bp Neighborhood of RT #1 [1, 4433] Toprim_2 RVT-GII Intron_maturas2 Feature: gene Location: 1-1008 bp Feature: gene Location: 1291-2220 bp Feature: domain Description: Toprim_2 Location: 1843-2131 bp Feature: domain Description: Toprim_2 Location: 1843-2131 bp Feature: gene Location: 2192-4000 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2456-3278 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2456-327 8 bp Feature: domain Description: Intron_maturas2 Location: 3347-3656 bp Feature: domain Description: Intron_maturas2 Location: 3347 -3656 bp Feature: gene Location: 4002-4184 bp Feature: gene Location: 4290-4433 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Toprim_2 (pfam13155), RVT-GII, Intron_maturas2 (pfam01348)

Seq: WDCO01000411.1 Bacteroides xylanisolvens strain BIOML-A15 scaffold411_size4263, whole genome shotgun sequence (4263 bp)
Overview 1 RT 1: 1185-4260 bp Neighborhood of RT #1 [1185, 4260] RVT-UG27 Feature: gene Location: 1185-1841 bp Feature: gene Location: 1885-2511 bp Feature: gene Location: 2529-3794 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 2718-3354 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 2718 -3354 bp Feature: gene Location: 3844-4260 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG27

Seq: WDCO01000435.1 Bacteroides xylanisolvens strain BIOML-A15 scaffold435_size3983, whole genome shotgun sequence (3983 bp)
Overview 1 RT 1: 3-3982 bp Neighborhood of RT #1 [3, 3982] DNA2 MTES_1575 DUF3320 RVT-Retrons Feature: gene Location: 3-1589 bp Feature: domain Description: DNA2 Location: 9-420 bp Feature: domain Description: DNA2 Location: 9 -420 bp Feature: domain Description: MTES_1575 Location: 489-774 bp Feature: domain Description: MTES_1575 Location: 489 -774 bp Feature: domain Description: DUF3320 Location: 1104-1239 bp Feature: domain Description: DUF3320 Location: 1104-1239 bp Feature: gene Location: 1640-2770 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1961-2504 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 19 61-2504 bp Feature: gene Location: 2978-3982 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DNA2 (COG1112), MTES_1575 (pfam18741), DUF3320 (pfam11784), RVT-Retrons

Seq: WDCO01000457.1 Bacteroides xylanisolvens strain BIOML-A15 scaffold457_size3795, whole genome shotgun sequence (3795 bp)
Overview 1 RT 1: 2-3229 bp Neighborhood of RT #1 [2, 3252] RVT_N RVT-GII GIIM LRR_AMN1 Feature: gene Location: 2-232 bp Feature: gene Location: 624-923 bp Feature: gene Location: 1007-2338 bp Feature: domain Description: RVT_N Location: 1010-1160 bp Feature: domain Description: RVT_N Location: 10 10 -1160 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1205-1850 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1205-1850 bp Feature: domain Description: GIIM Note: maturase Location: 1904-2138 bp Feature: domain Description: GIIM Note: maturase Location: 1904-2138 bp Feature: gene Location: 2432-2566 bp Feature: gene Location: 2581-3252 bp Feature: domain Description: LRR_AMN1 Location: 2956-3229 bp Feature: domain Description: LRR_AMN1 Location: 2956-3229 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), LRR_AMN1 (sd00034)

Seq: WDCO01000638.1 Bacteroides xylanisolvens strain BIOML-A15 scaffold638_size2661, whole genome shotgun sequence (2661 bp)
Overview 1 RT 1: 1441-2653 bp Neighborhood of RT #1 [1441, 2658] RVT-DGRs Feature: gene Location: 1441-1674 bp Feature: gene Location: 1696-1953 bp Feature: gene Location: 2050-2658 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2263-2653 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2263-2653 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: WDCO01000066.1 Bacteroides xylanisolvens strain BIOML-A15 scaffold66_size15882, whole genome shotgun sequence (15882 bp)
Overview 1 RT 1: 7000-10570 bp Neighborhood of RT #1 [7000, 10570] RVT-DGRs Feature: gene Location: 7000-7206 bp Feature: gene Location: 7203-7631 bp Feature: gene Location: 7594-8781 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 7927-8554 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 7927-8554 bp Feature: gene Location: 8903-10270 bp Feature: gene Location: 10280-10570 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: WDCO01000079.1 Bacteroides xylanisolvens strain BIOML-A15 scaffold79_size13820, whole genome shotgun sequence (13820 bp)
Overview 1 RT 1: 2-3732 bp Neighborhood of RT #1 [2, 3749] Bac_Flav_CT_G RVT_N RVT-GII GIIM Bac_Flav_CT_G Feature: gene Location: 2-1240 bp Feature: domain Description: Bac_Flav_CT_G Location: 122-1241 bp Feature: domain Description: Bac_Flav_CT_G Location: 122-1241 bp Feature: gene Location: 1221-2948 bp Feature: domain Description: RVT_N Location: 1326-1569 bp Feature: domain Description: RVT_N Location: 13 26-1569 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1614-2262 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1614-2262 bp Feature: domain Description: GIIM Note: maturase Location: 2313-2547 bp Feature: domain Description: GIIM Note: maturase Location: 2313 -2547 bp Feature: gene Location: 3280-3435 bp Feature: gene Location: 3504-3749 bp Feature: domain Description: Bac_Flav_CT_G Location: 3507-3732 bp Feature: domain Description: Bac_Flav_CT_G Location: 3507-3732 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Bac_Flav_CT_G (TIGR03783), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)