myRT

myRT report for GCA_009183885.1_ASM918388v1

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Seq: WEFJ01000001.1 Enterococcus faecium strain VRECG34, whole genome shotgun sequence (2898795 bp)
Overview 1 RT 1: 51816-59415 bp 2 RT 2: 278615-292796 bp 3 RT 3: 1051003-1056862 bp 4 RT 4: 1060268-1066908 bp 5 RT 5: 2762722-2782943 bp Neighborhood of RT #1 [51816, 59415] TcpE AAA_10 RVT-GII AAA_10 Neighborhood of RT #2 [278615, 292796] FtsK HTH_XRE Rol_Rep_N Rep_trans RVT-GII HNHc ArdA AAA_10 RVT-GII AAA_10 Neighborhood of RT #3 [1051003, 1056862] HTH_XRE Rol_Rep_N Rep_trans RVT-GII HNHc DDE_Tnp_1 Neighborhood of RT #4 [1060268, 1066949] TcpE AAA_10 RVT-GII AAA_10 Transposase_mut Neighborhood of RT #5 [2762722, 2782943] RelB_DinJ FtsK_SpoIIIE RVT-GII HNHc FtsK Zeta_toxin HTH_XRE Rol_Rep_N Rep_trans RVT-GII HNHc ArdA RVT-GII HNHc AAA_10 Feature: gene Location: 51816-52274 bp Feature: domain Description: TcpE Location: 51897-52194 bp Feature: domain Description: TcpE Location: 51 897-521 94 bp Feature: gene Location: 52258-53811 bp Feature: domain Description: AAA_10 Location: 53590-53776 bp Feature: domain Description: AAA_1 0 Location: 53590-53776 bp Feature: gene Location: 54508-56334 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 54808-55507 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 54808-55507 bp Feature: gene Location: 56696-57391 bp Feature: domain Description: AAA_10 Location: 56702-57353 bp Feature: domain Description: AAA_1 0 Location: 56702-57353 bp Feature: gene Location: 57388-59415 bp Feature: gene Location: 278615-280000 bp Feature: domain Description: FtsK Location: 279224-279857 bp Feature: domain Description: FtsK Location: 279224-279857 bp Feature: gene Location: 280179-281384 bp Feature: domain Description: HTH_XRE Location: 280224-280368 bp Feature: domain Description: HTH_XRE Location: 280224-280368 bp Feature: domain Description: Rol_Rep_N Location: 280395-280662 bp Feature: domain Description: Rol_Rep_N Location: 280395-280662 bp Feature: domain Description: Rep_trans Location: 280686-281295 bp Feature: domain Description: Rep_trans Location: 280686-281 295 bp Feature: gene Location: 282168-284078 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 282501-283239 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 282501 -283239 bp Feature: domain Description: HNHc Note: nucleases Location: 283794-283959 bp Feature: domain Description: HNHc Note: nucleases Location: 283794-283959 bp Feature: gene Location: 284239-284406 bp Feature: gene Location: 284523-285020 bp Feature: domain Description: ArdA Location: 284541-285006 bp Feature: domain Description: ArdA Location: 284541 -285006 bp Feature: gene Location: 285432-287036 bp Feature: domain Description: AAA_10 Location: 286815-287001 bp Feature: domain Description: AAA_1 0 Location: 28681 5-287001 bp Feature: gene Location: 287733-289559 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 288033-288732 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 288033-288732 bp Feature: gene Location: 289693-290610 bp Feature: domain Description: AAA_10 Location: 289699-290578 bp Feature: domain Description: AAA_1 0 Location: 289699-290578 bp Feature: gene Location: 290613-292796 bp Feature: gene Location: 1051003-1051257 bp Feature: gene Location: 1051513-1052697 bp Feature: domain Description: HTH_XRE Location: 1051543-1051687 bp Feature: domain Description: HTH_XRE Location: 1 051 543-1 051 687 bp Feature: domain Description: Rol_Rep_N Location: 1051720-1051984 bp Feature: domain Description: Rol_Rep_N Location: 1 051 720-1 051 984 bp Feature: domain Description: Rep_trans Location: 1052008-1052620 bp Feature: domain Description: Rep_trans Location: 1 052008-1 052620 bp Feature: gene Location: 1053577-1055418 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1053910-1054648 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 05391 0-1 054648 bp Feature: domain Description: HNHc Note: nucleases Location: 1055203-1055368 bp Feature: domain Description: HNHc Note: nucleases Location: 1 055203-1 055368 bp Feature: gene Location: 1055516-1056424 bp Feature: domain Description: DDE_Tnp_1 Location: 1055861-1056359 bp Feature: domain Description: DDE_Tnp_1 Location: 1 055861 -1 056359 bp Feature: gene Location: 1056722-1056862 bp Feature: gene Location: 1060268-1060657 bp Feature: domain Description: TcpE Location: 1060286-1060586 bp Feature: domain Description: TcpE Location: 1 060286-1 060586 bp Feature: gene Location: 1060644-1062194 bp Feature: domain Description: AAA_10 Location: 1061973-1062156 bp Feature: domain Description: AAA_1 0 Location: 1 061 973-1 0621 56 bp Feature: gene Location: 1062891-1064717 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1063191-1063890 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 0631 91 -1 063890 bp Feature: gene Location: 1064851-1065669 bp Feature: domain Description: AAA_10 Location: 1064857-1065655 bp Feature: domain Description: AAA_1 0 Location: 1 064857-1 065655 bp Feature: gene Location: 1065762-1066949 bp Feature: domain Description: Transposase_mut Location: 1065765-1066908 bp Feature: domain Description: Transposase_mut Location: 1 065765-1 066908 bp Feature: gene Location: 2762722-2763057 bp Feature: domain Description: RelB_DinJ Location: 2762926-2763049 bp Feature: domain Description: RelB_DinJ Location: 2762926-2763049 bp Feature: gene Location: 2763119-2764156 bp Feature: domain Description: FtsK_SpoIIIE Location: 2763791-2764037 bp Feature: domain Description: FtsK_SpoIIIE Location: 2763791 -2764037 bp Feature: gene Location: 2764750-2766624 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2765116-2765812 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27651 1 6-276581 2 bp Feature: domain Description: HNHc Note: nucleases Location: 2766352-2766511 bp Feature: domain Description: HNHc Note: nucleases Location: 2766352-276651 1 bp Feature: gene Location: 2766726-2767070 bp Feature: domain Description: FtsK Location: 2766738-2766978 bp Feature: domain Description: FtsK Location: 2766738-2766978 bp Feature: gene Location: 2767165-2767404 bp Feature: domain Description: Zeta_toxin Location: 2767264-2767393 bp Feature: domain Description: Zeta_toxin Location: 2767264-2767393 bp Feature: gene Location: 2769205-2769495 bp Feature: gene Location: 2769753-2770937 bp Feature: domain Description: HTH_XRE Location: 2769783-2769927 bp Feature: domain Description: HTH_XRE Location: 2769783-2769927 bp Feature: domain Description: Rol_Rep_N Location: 2769960-2770224 bp Feature: domain Description: Rol_Rep_N Location: 2769960-2770224 bp Feature: domain Description: Rep_trans Location: 2770248-2770860 bp Feature: domain Description: Rep_trans Location: 2770248-2770860 bp Feature: gene Location: 2771770-2773680 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2772103-2772841 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27721 03-2772841 bp Feature: domain Description: HNHc Note: nucleases Location: 2773396-2773561 bp Feature: domain Description: HNHc Note: nucleases Location: 2773396-2773561 bp Feature: gene Location: 2773847-2774008 bp Feature: gene Location: 2774020-2774523 bp Feature: domain Description: ArdA Location: 2774038-2774509 bp Feature: domain Description: ArdA Location: 2774038-2774509 bp Feature: gene Location: 2775756-2777015 bp Feature: gene Location: 2777018-2777167 bp Feature: gene Location: 2777693-2779495 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2777990-2778689 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2777990-2778689 bp Feature: domain Description: HNHc Note: nucleases Location: 2779244-2779382 bp Feature: domain Description: HNHc Note: nucleases Location: 2779244-2779382 bp Feature: gene Location: 2779535-2780815 bp Feature: domain Description: AAA_10 Location: 2779697-2780780 bp Feature: domain Description: AAA_1 0 Location: 2779697-2780780 bp Feature: gene Location: 2780820-2782943 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TcpE (pfam12648), AAA_10 (pfam12846), RVT-GII, FtsK (COG1674), HTH_XRE (smart00530), Rol_Rep_N (pfam18106), Rep_trans (pfam02486), HNHc (smart00507), ArdA (pfam07275), DDE_Tnp_1 (pfam01609)
Transposase_mut (pfam00872), RelB_DinJ (TIGR02384), FtsK_SpoIIIE (pfam01580), Zeta_toxin (pfam06414)

Seq: WEFJ01000003.1 Enterococcus faecium strain VRECG34, whole genome shotgun sequence (55775 bp)
Overview 1 RT 1: 24351-29435 bp Neighborhood of RT #1 [24351, 29440] VirB4 RVT-GII HNHc MazE Feature: gene Location: 24351-26045 bp Feature: domain Description: VirB4 Location: 24669-25353 bp Feature: domain Description: VirB4 Location: 2 4669-2 5353 bp Feature: gene Location: 26313-26546 bp Feature: gene Location: 26733-28610 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27048-27786 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 7048-2 7786 bp Feature: domain Description: HNHc Note: nucleases Location: 28344-28497 bp Feature: domain Description: HNHc Note: nucleases Location: 2 8344-2 8497 bp Feature: gene Location: 28798-29118 bp Feature: gene Location: 29177-29440 bp Feature: domain Description: MazE Location: 29198-29435 bp Feature: domain Description: MazE Location: 2 9198-2 9435 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT VirB4 (COG3451), RVT-GII, HNHc (smart00507), MazE (COG2336)

Seq: WEFJ01000004.1 Enterococcus faecium strain VRECG34, whole genome shotgun sequence (45589 bp)
Overview 1 RT 1: 26561-31399 bp Neighborhood of RT #1 [26561, 31428] Tra8 RVT-AbiP2 HsdM Rve Feature: gene Location: 26561-26722 bp Feature: gene Location: 26805-27758 bp Feature: domain Description: Tra8 Location: 26808-27735 bp Feature: domain Description: Tra8 Location: 26808-2773 5 bp Feature: gene Location: 27736-29211 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 28084-28549 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 28084-28549 bp Feature: gene Location: 29549-30712 bp Feature: domain Description: HsdM Location: 29570-30686 bp Feature: domain Description: HsdM Location: 29570-3 0686 bp Feature: gene Location: 30742-31428 bp Feature: domain Description: Rve Location: 30751-31399 bp Feature: domain Description: Rve Location: 3 0751-3 13 99 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tra8 (COG2826), RVT-AbiP2, HsdM (COG0286), Rve (COG3316)