myRT

myRT report for GCA_009184055.1_ASM918405v1

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Seq: WEFP01000001.1 Enterococcus faecium strain VRECG27, whole genome shotgun sequence (2695518 bp)
Overview 1 RT 1: 2087742-2092796 bp Neighborhood of RT #1 [2087742, 2092796] ArdA RVT-GII HNHc HTH_XRE Rol_Rep_N Rep_trans Feature: gene Location: 2087742-2088245 bp Feature: domain Description: ArdA Location: 2087760-2088231 bp Feature: domain Description: ArdA Location: 2087760-2088231 bp Feature: gene Location: 2088247-2088456 bp Feature: gene Location: 2088586-2090496 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2088919-2089657 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 208891 9-2089657 bp Feature: domain Description: HNHc Note: nucleases Location: 2090212-2090377 bp Feature: domain Description: HNHc Note: nucleases Location: 209021 2-2090377 bp Feature: gene Location: 2091376-2092560 bp Feature: domain Description: HTH_XRE Location: 2091406-2091550 bp Feature: domain Description: HTH_XRE Location: 2091 406-2091 550 bp Feature: domain Description: Rol_Rep_N Location: 2091583-2091847 bp Feature: domain Description: Rol_Rep_N Location: 2091 583-2091 847 bp Feature: domain Description: Rep_trans Location: 2091871-2092483 bp Feature: domain Description: Rep_trans Location: 2091 871 -2092483 bp Feature: gene Location: 2092653-2092796 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ArdA (pfam07275), RVT-GII, HNHc (smart00507), HTH_XRE (smart00530), Rol_Rep_N (pfam18106), Rep_trans (pfam02486)

Seq: WEFP01000012.1 Enterococcus faecium strain VRECG27, whole genome shotgun sequence (18925 bp)
Overview 1 RT 1: 4562-8866 bp Neighborhood of RT #1 [4562, 8866] PRK09290 AlbA_2 RVT-AbiP2 DUF3841 Feature: gene Location: 4562-5836 bp Feature: domain Description: PRK09290 Location: 4580-5828 bp Feature: domain Description: PRK092 90 Location: 4580-582 8 bp Feature: gene Location: 5937-6251 bp Feature: domain Description: AlbA_2 Location: 5976-6147 bp Feature: domain Description: AlbA_2 Location: 5976-6147 bp Feature: gene Location: 6397-7893 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 6805-7261 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 6805-72 61 bp Feature: gene Location: 8071-8550 bp Feature: domain Description: DUF3841 Location: 8080-8455 bp Feature: domain Description: DUF3841 Location: 8080-8455 bp Feature: gene Location: 8717-8866 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09290 (allantoate amidohydrolase; Reviewed), AlbA_2 (pfam04326), RVT-AbiP2, DUF3841 (pfam12952)

Seq: WEFP01000015.1 Enterococcus faecium strain VRECG27, whole genome shotgun sequence (9933 bp)
Overview 1 RT 1: 120-3840 bp Neighborhood of RT #1 [120, 3860] RVT-GII HNHc FtsK Feature: gene Location: 120-1979 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 429-1170 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 429-1170 bp Feature: domain Description: HNHc Note: nucleases Location: 1725-1863 bp Feature: domain Description: HNHc Note: nucleases Location: 1725-1863 bp Feature: gene Location: 2098-2328 bp Feature: gene Location: 2694-3860 bp Feature: domain Description: FtsK Location: 3375-3840 bp Feature: domain Description: FtsK Location: 3 3 75-3 840 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), FtsK (COG1674)

Seq: WEFP01000003.1 Enterococcus faecium strain VRECG27, whole genome shotgun sequence (197514 bp)
Overview 1 RT 1: 19814-24898 bp Neighborhood of RT #1 [19814, 24903] VirB4 RVT-GII HNHc MazE Feature: gene Location: 19814-21508 bp Feature: domain Description: VirB4 Location: 20132-20816 bp Feature: domain Description: VirB4 Location: 20132-20816 bp Feature: gene Location: 21776-22009 bp Feature: gene Location: 22196-24073 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22511-23249 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22511-2324 9 bp Feature: domain Description: HNHc Note: nucleases Location: 23807-23960 bp Feature: domain Description: HNHc Note: nucleases Location: 23807-23960 bp Feature: gene Location: 24261-24581 bp Feature: gene Location: 24640-24903 bp Feature: domain Description: MazE Location: 24661-24898 bp Feature: domain Description: MazE Location: 24 661-24 898 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT VirB4 (COG3451), RVT-GII, HNHc (smart00507), MazE (COG2336)

Seq: WEFP01000004.1 Enterococcus faecium strain VRECG27, whole genome shotgun sequence (61089 bp)
Overview 1 RT 1: 22665-27945 bp Neighborhood of RT #1 [22665, 28637] Glucosaminidase Peptidase_M23 RVT-GII HNHc VirB4 Feature: gene Location: 22665-23870 bp Feature: domain Description: Glucosaminidase Location: 22941-23337 bp Feature: domain Description: Glucosaminidase Location: 22941-23337 bp Feature: domain Description: Peptidase_M23 Location: 23514-23751 bp Feature: domain Description: Peptidase_M23 Location: 235 14-2375 1 bp Feature: gene Location: 23870-24190 bp Feature: gene Location: 24378-26255 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24693-25431 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24693-25 431 bp Feature: domain Description: HNHc Note: nucleases Location: 25989-26142 bp Feature: domain Description: HNHc Note: nucleases Location: 25 989-26142 bp Feature: gene Location: 26442-26675 bp Feature: gene Location: 26943-28637 bp Feature: domain Description: VirB4 Location: 27261-27945 bp Feature: domain Description: VirB4 Location: 27261-27945 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Glucosaminidase (pfam01832), Peptidase_M23 (pfam01551), RVT-GII, HNHc (smart00507), VirB4 (COG3451)

Seq: WEFP01000006.1 Enterococcus faecium strain VRECG27, whole genome shotgun sequence (40181 bp)
Overview 1 RT 1: 26279-31145 bp Neighborhood of RT #1 [26279, 31174] Tra8 RVT-AbiP2 HsdM Rve Feature: gene Location: 26279-26440 bp Feature: gene Location: 26523-27476 bp Feature: domain Description: Tra8 Location: 26526-27453 bp Feature: domain Description: Tra8 Location: 26 526 -27453 bp Feature: gene Location: 27454-28929 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 27802-28267 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 27802-2826 7 bp Feature: gene Location: 29267-30454 bp Feature: domain Description: HsdM Location: 29288-30443 bp Feature: domain Description: HsdM Location: 29288-30443 bp Feature: gene Location: 30488-31174 bp Feature: domain Description: Rve Location: 30497-31145 bp Feature: domain Description: Rve Location: 30497-31145 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tra8 (COG2826), RVT-AbiP2, HsdM (COG0286), Rve (COG3316)

Seq: WEFP01000008.1 Enterococcus faecium strain VRECG27, whole genome shotgun sequence (32140 bp)
Overview 1 RT 1: 26755-32139 bp Neighborhood of RT #1 [26755, 32138] TcpE AAA_10 RVT-GII AAA_10 Feature: gene Location: 26755-27144 bp Feature: domain Description: TcpE Location: 26773-27073 bp Feature: domain Description: TcpE Location: 267 7 3-27 07 3 bp Feature: gene Location: 27131-28681 bp Feature: domain Description: AAA_10 Location: 28460-28643 bp Feature: domain Description: AAA_10 Location: 28460-28643 bp Feature: gene Location: 29378-31204 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29678-30377 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2967 8-3037 7 bp Feature: gene Location: 31338-32138 bp Feature: domain Description: AAA_10 Location: 31344-32139 bp Feature: domain Description: AAA_10 Location: 31344-32139 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TcpE (pfam12648), AAA_10 (pfam12846), RVT-GII