myRT

myRT report for GCA_009184155.1_ASM918415v1

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Seq: WEFV01000001.1 Enterococcus faecium strain VRECG21, whole genome shotgun sequence (2935592 bp)
Overview 1 RT 1: 1849205-1860719 bp 2 RT 2: 2807709-2812749 bp Neighborhood of RT #1 [1849205, 1860739] ArdA RVT-GII HNHc HTH_XRE Rol_Rep_N Rep_trans Zeta_toxin RVT-GII HNHc FtsK Neighborhood of RT #2 [2807709, 2812763] HTH_XRE Rol_Rep_N Rep_trans RVT-GII HNHc ArdA Feature: gene Location: 1849205-1849759 bp Feature: domain Description: ArdA Location: 1849322-1849748 bp Feature: domain Description: ArdA Location: 1 849322-1 849748 bp Feature: gene Location: 1849719-1849871 bp Feature: gene Location: 1850047-1851957 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1850380-1851118 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 850380-1 851 1 1 8 bp Feature: domain Description: HNHc Note: nucleases Location: 1851673-1851838 bp Feature: domain Description: HNHc Note: nucleases Location: 1 851 673-1 851 838 bp Feature: gene Location: 1852837-1854021 bp Feature: domain Description: HTH_XRE Location: 1852867-1853011 bp Feature: domain Description: HTH_XRE Location: 1 852867-1 85301 1 bp Feature: domain Description: Rol_Rep_N Location: 1853044-1853308 bp Feature: domain Description: Rol_Rep_N Location: 1 853044-1 853308 bp Feature: domain Description: Rep_trans Location: 1853332-1853944 bp Feature: domain Description: Rep_trans Location: 1 853332-1 853944 bp Feature: gene Location: 1854114-1854257 bp Feature: gene Location: 1855935-1856609 bp Feature: domain Description: Zeta_toxin Location: 1856034-1856517 bp Feature: domain Description: Zeta_toxin Location: 1 856034-1 85651 7 bp Feature: gene Location: 1856687-1856926 bp Feature: gene Location: 1857020-1858879 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1857329-1858070 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 857329-1 858070 bp Feature: domain Description: HNHc Note: nucleases Location: 1858625-1858763 bp Feature: domain Description: HNHc Note: nucleases Location: 1 858625-1 858763 bp Feature: gene Location: 1858998-1859228 bp Feature: gene Location: 1859594-1860739 bp Feature: domain Description: FtsK Location: 1860254-1860719 bp Feature: domain Description: FtsK Location: 1 860254-1 86071 9 bp Feature: gene Location: 2807709-2807852 bp Feature: gene Location: 2807945-2809129 bp Feature: domain Description: HTH_XRE Location: 2807975-2808119 bp Feature: domain Description: HTH_XRE Location: 2807975-28081 1 9 bp Feature: domain Description: Rol_Rep_N Location: 2808152-2808416 bp Feature: domain Description: Rol_Rep_N Location: 28081 52-280841 6 bp Feature: domain Description: Rep_trans Location: 2808440-2809052 bp Feature: domain Description: Rep_trans Location: 2808440-2809052 bp Feature: gene Location: 2810009-2811919 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2810342-2811080 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 281 0342-281 1 080 bp Feature: domain Description: HNHc Note: nucleases Location: 2811635-2811800 bp Feature: domain Description: HNHc Note: nucleases Location: 281 1 635-281 1 800 bp Feature: gene Location: 2812107-2812247 bp Feature: gene Location: 2812260-2812763 bp Feature: domain Description: ArdA Location: 2812278-2812749 bp Feature: domain Description: ArdA Location: 281 2278-281 2749 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ArdA (pfam07275), RVT-GII, HNHc (smart00507), HTH_XRE (smart00530), Rol_Rep_N (pfam18106), Rep_trans (pfam02486), Zeta_toxin (pfam06414), FtsK (COG1674)

Seq: WEFV01000003.1 Enterococcus faecium strain VRECG21, whole genome shotgun sequence (55373 bp)
Overview 1 RT 1: 40238-45518 bp Neighborhood of RT #1 [40238, 46210] Glucosaminidase Peptidase_M23 RVT-GII HNHc VirB4 Feature: gene Location: 40238-41443 bp Feature: domain Description: Glucosaminidase Location: 40514-40910 bp Feature: domain Description: Glucosaminidase Location: 40514-40910 bp Feature: domain Description: Peptidase_M23 Location: 41087-41324 bp Feature: domain Description: Peptidase_M2 3 Location: 41087-4132 4 bp Feature: gene Location: 41443-41763 bp Feature: gene Location: 41951-43828 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42266-43004 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42 2 66-43004 bp Feature: domain Description: HNHc Note: nucleases Location: 43562-43715 bp Feature: domain Description: HNHc Note: nucleases Location: 43562 -43715 bp Feature: gene Location: 44015-44248 bp Feature: gene Location: 44516-46210 bp Feature: domain Description: VirB4 Location: 44834-45518 bp Feature: domain Description: VirB4 Location: 44834-45518 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Glucosaminidase (pfam01832), Peptidase_M23 (pfam01551), RVT-GII, HNHc (smart00507), VirB4 (COG3451)

Seq: WEFV01000004.1 Enterococcus faecium strain VRECG21, whole genome shotgun sequence (43618 bp)
Overview 1 RT 1: 28344-34252 bp Neighborhood of RT #1 [28344, 34284] Tra8 RVT-AbiP2 Transposase_mut HsdM Feature: gene Location: 28344-28505 bp Feature: gene Location: 28588-29541 bp Feature: domain Description: Tra8 Location: 28591-29518 bp Feature: domain Description: Tra8 Location: 28591-29518 bp Feature: gene Location: 29519-30994 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 29867-30332 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 29867-3 03 3 2 bp Feature: gene Location: 31366-32553 bp Feature: domain Description: Transposase_mut Location: 31369-32512 bp Feature: domain Description: Transposase_mut Location: 3 13 69-3 2512 bp Feature: gene Location: 32806-34284 bp Feature: domain Description: HsdM Location: 32827-34252 bp Feature: domain Description: HsdM Location: 3 2827-3 4252 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tra8 (COG2826), RVT-AbiP2, Transposase_mut (pfam00872), HsdM (COG0286)