myRT

myRT report for GCA_009184165.1_ASM918416v1

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Seq: WEFT01000001.1 Enterococcus faecium strain VRECG23, whole genome shotgun sequence (2832746 bp)
Overview 1 RT 1: 280142-286533 bp 2 RT 2: 1857480-1864090 bp Neighborhood of RT #1 [280142, 286547] FtsK HTH_XRE Rol_Rep_N Rep_trans RVT-GII HNHc ArdA Neighborhood of RT #2 [1857480, 1864161] Transposase_mut AAA_10 RVT-GII AAA_10 TcpE Feature: gene Location: 280142-281527 bp Feature: domain Description: FtsK Location: 280751-281384 bp Feature: domain Description: FtsK Location: 280751 -281 384 bp Feature: gene Location: 281706-282911 bp Feature: domain Description: HTH_XRE Location: 281751-281895 bp Feature: domain Description: HTH_XRE Location: 281 751 -281 895 bp Feature: domain Description: Rol_Rep_N Location: 281922-282189 bp Feature: domain Description: Rol_Rep_N Location: 281 922-2821 89 bp Feature: domain Description: Rep_trans Location: 282213-282822 bp Feature: domain Description: Rep_trans Location: 28221 3-282822 bp Feature: gene Location: 283695-285605 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 284028-284766 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 284028-284766 bp Feature: domain Description: HNHc Note: nucleases Location: 285321-285486 bp Feature: domain Description: HNHc Note: nucleases Location: 285321 -285486 bp Feature: gene Location: 285766-285933 bp Feature: gene Location: 286050-286547 bp Feature: domain Description: ArdA Location: 286068-286533 bp Feature: domain Description: ArdA Location: 286068-286533 bp Feature: gene Location: 1857480-1858667 bp Feature: domain Description: Transposase_mut Location: 1857483-1858626 bp Feature: domain Description: Transposase_mut Location: 1 857483-1 858626 bp Feature: gene Location: 1858760-1859578 bp Feature: domain Description: AAA_10 Location: 1858766-1859564 bp Feature: domain Description: AAA_1 0 Location: 1 858766-1 859564 bp Feature: gene Location: 1859712-1861538 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1860012-1860711 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 86001 2-1 86071 1 bp Feature: gene Location: 1862235-1863785 bp Feature: domain Description: AAA_10 Location: 1863564-1863747 bp Feature: domain Description: AAA_1 0 Location: 1 863564-1 863747 bp Feature: gene Location: 1863772-1864161 bp Feature: domain Description: TcpE Location: 1863790-1864090 bp Feature: domain Description: TcpE Location: 1 863790-1 864090 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FtsK (COG1674), HTH_XRE (smart00530), Rol_Rep_N (pfam18106), Rep_trans (pfam02486), RVT-GII, HNHc (smart00507), ArdA (pfam07275), Transposase_mut (pfam00872), AAA_10 (pfam12846), TcpE (pfam12648)

Seq: WEFT01000002.1 Enterococcus faecium strain VRECG23, whole genome shotgun sequence (253754 bp)
Overview 1 RT 1: 49363-54574 bp Neighborhood of RT #1 [49363, 55266] Glucosaminidase Peptidase_M23 RVT-GII HNHc VirB4 Feature: gene Location: 49363-50568 bp Feature: domain Description: Glucosaminidase Location: 49639-50035 bp Feature: domain Description: Glucosaminidase Location: 49639-50035 bp Feature: domain Description: Peptidase_M23 Location: 50212-50449 bp Feature: domain Description: Peptidase_M2 3 Location: 502 12 -50449 bp Feature: gene Location: 50568-50888 bp Feature: gene Location: 51076-52953 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51391-52129 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51391-52 12 9 bp Feature: domain Description: HNHc Note: nucleases Location: 52687-52840 bp Feature: domain Description: HNHc Note: nucleases Location: 52 687-52 840 bp Feature: gene Location: 53140-53373 bp Feature: gene Location: 53641-55266 bp Feature: domain Description: VirB4 Location: 53890-54574 bp Feature: domain Description: VirB4 Location: 53890-54574 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Glucosaminidase (pfam01832), Peptidase_M23 (pfam01551), RVT-GII, HNHc (smart00507), VirB4 (COG3451)

Seq: WEFT01000003.1 Enterococcus faecium strain VRECG23, whole genome shotgun sequence (40539 bp)
Overview 1 RT 1: 26518-30316 bp Neighborhood of RT #1 [26518, 30316] Rve HsdM RVT-AbiP2 Tra8 Feature: gene Location: 26518-27204 bp Feature: domain Description: Rve Location: 26527-27175 bp Feature: domain Description: Rve Location: 26527-27175 bp Feature: gene Location: 27227-27358 bp Feature: domain Description: HsdM Location: 27248-27335 bp Feature: domain Description: HsdM Location: 27248-273 3 5 bp Feature: gene Location: 27696-29171 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 28044-28509 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 28044-28509 bp Feature: gene Location: 29149-30102 bp Feature: domain Description: Tra8 Location: 29152-30079 bp Feature: domain Description: Tra8 Location: 29152-3 0079 bp Feature: gene Location: 30185-30316 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Rve (COG3316), HsdM (COG0286), RVT-AbiP2, Tra8 (COG2826)