myRT

myRT report for GCA_009184205.1_ASM918420v1

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Seq: WEFX01000001.1 Enterococcus faecium strain VRECG19, whole genome shotgun sequence (2799974 bp)
Overview 1 RT 1: 2672565-2677605 bp Neighborhood of RT #1 [2672565, 2677619] HTH_XRE Rol_Rep_N Rep_trans RVT-GII HNHc ArdA Feature: gene Location: 2672565-2672708 bp Feature: gene Location: 2672801-2673985 bp Feature: domain Description: HTH_XRE Location: 2672831-2672975 bp Feature: domain Description: HTH_XRE Location: 2672831 -2672975 bp Feature: domain Description: Rol_Rep_N Location: 2673008-2673272 bp Feature: domain Description: Rol_Rep_N Location: 2673008-2673272 bp Feature: domain Description: Rep_trans Location: 2673296-2673908 bp Feature: domain Description: Rep_trans Location: 2673296-2673908 bp Feature: gene Location: 2674865-2676775 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2675198-2675936 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26751 98-2675936 bp Feature: domain Description: HNHc Note: nucleases Location: 2676491-2676656 bp Feature: domain Description: HNHc Note: nucleases Location: 2676491 -2676656 bp Feature: gene Location: 2676963-2677103 bp Feature: gene Location: 2677116-2677619 bp Feature: domain Description: ArdA Location: 2677134-2677605 bp Feature: domain Description: ArdA Location: 26771 34-2677605 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), Rol_Rep_N (pfam18106), Rep_trans (pfam02486), RVT-GII, HNHc (smart00507), ArdA (pfam07275)

Seq: WEFX01000004.1 Enterococcus faecium strain VRECG19, whole genome shotgun sequence (64533 bp)
Overview 1 RT 1: 15707-21534 bp Neighborhood of RT #1 [15707, 21563] VirB4 RVT-GII HNHc CwlT_like Spr Feature: gene Location: 15707-17332 bp Feature: domain Description: VirB4 Location: 16031-16643 bp Feature: domain Description: VirB4 Location: 16031-16643 bp Feature: gene Location: 17600-17833 bp Feature: gene Location: 18020-19897 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18335-19073 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18335-19073 bp Feature: domain Description: HNHc Note: nucleases Location: 19631-19784 bp Feature: domain Description: HNHc Note: nucleases Location: 19631-19784 bp Feature: gene Location: 20085-20405 bp Feature: gene Location: 20427-21563 bp Feature: domain Description: CwlT_like Location: 20673-21150 bp Feature: domain Description: CwlT_like Location: 2 0673-2 1150 bp Feature: domain Description: Spr Location: 21174-21534 bp Feature: domain Description: Spr Location: 2 1174-2 1534 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT VirB4 (COG3451), RVT-GII, HNHc (smart00507), CwlT_like, Spr (COG0791)

Seq: WEFX01000005.1 Enterococcus faecium strain VRECG19, whole genome shotgun sequence (55065 bp)
Overview 1 RT 1: 156-4553 bp Neighborhood of RT #1 [156, 5245] MazE RVT-GII HNHc VirB4 Feature: gene Location: 156-419 bp Feature: domain Description: MazE Location: 177-414 bp Feature: domain Description: MazE Location: 177-414 bp Feature: gene Location: 478-798 bp Feature: gene Location: 986-2863 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1301-2039 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13 01-203 9 bp Feature: domain Description: HNHc Note: nucleases Location: 2597-2750 bp Feature: domain Description: HNHc Note: nucleases Location: 2597-2750 bp Feature: gene Location: 3050-3283 bp Feature: gene Location: 3551-5245 bp Feature: domain Description: VirB4 Location: 3869-4553 bp Feature: domain Description: VirB4 Location: 3 869-4553 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MazE (COG2336), RVT-GII, HNHc (smart00507), VirB4 (COG3451)

Seq: WEFX01000006.1 Enterococcus faecium strain VRECG19, whole genome shotgun sequence (44451 bp)
Overview 1 RT 1: 29436-34582 bp Neighborhood of RT #1 [29436, 34611] Tra8 RVT-AbiP2 HsdM Rve Feature: gene Location: 29436-29597 bp Feature: gene Location: 29680-30633 bp Feature: domain Description: Tra8 Location: 29683-30610 bp Feature: domain Description: Tra8 Location: 29683-30610 bp Feature: gene Location: 30611-32086 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 30959-31424 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 30959-314 24 bp Feature: gene Location: 32424-33902 bp Feature: domain Description: HsdM Location: 32445-33870 bp Feature: domain Description: HsdM Location: 324 4 5-33870 bp Feature: gene Location: 33925-34611 bp Feature: domain Description: Rve Location: 33934-34582 bp Feature: domain Description: Rve Location: 33934 -34 582 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tra8 (COG2826), RVT-AbiP2, HsdM (COG0286), Rve (COG3316)