myRT

myRT report for GCA_009184235.1_ASM918423v1

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Seq: WEFW01000001.1 Enterococcus faecium strain VRECG20, whole genome shotgun sequence (2931845 bp)
Overview 1 RT 1: 129575-140480 bp 2 RT 2: 1285567-1297089 bp Neighborhood of RT #1 [129575, 140494] RelB_DinJ FtsK_SpoIIIE RVT-GII HNHc FtsK Dcm HTH_XRE Rol_Rep_N Rep_trans RVT-GII HNHc ArdA Neighborhood of RT #2 [1285567, 1297100] FtsK RVT-GII HNHc Zeta_toxin HTH_XRE Rol_Rep_N Rep_trans RVT-GII HNHc ArdA Feature: gene Location: 129575-129919 bp Feature: domain Description: RelB_DinJ Location: 129785-129911 bp Feature: domain Description: RelB_DinJ Location: 1 29785-1 2991 1 bp Feature: gene Location: 129988-131004 bp Feature: domain Description: FtsK_SpoIIIE Location: 130645-130885 bp Feature: domain Description: FtsK_SpoIIIE Location: 1 30645-1 30885 bp Feature: gene Location: 131598-133472 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 131964-132660 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 31 964-1 32660 bp Feature: domain Description: HNHc Note: nucleases Location: 133200-133359 bp Feature: domain Description: HNHc Note: nucleases Location: 1 33200-1 33359 bp Feature: gene Location: 133574-133954 bp Feature: domain Description: FtsK Location: 133589-133829 bp Feature: domain Description: FtsK Location: 1 33589-1 33829 bp Feature: gene Location: 133999-135141 bp Feature: domain Description: Dcm Location: 134002-135115 bp Feature: domain Description: Dcm Location: 1 34002-1 351 1 5 bp Feature: gene Location: 135676-136860 bp Feature: domain Description: HTH_XRE Location: 135706-135850 bp Feature: domain Description: HTH_XRE Location: 1 35706-1 35850 bp Feature: domain Description: Rol_Rep_N Location: 135883-136147 bp Feature: domain Description: Rol_Rep_N Location: 1 35883-1 361 47 bp Feature: domain Description: Rep_trans Location: 136171-136783 bp Feature: domain Description: Rep_trans Location: 1 361 71 -1 36783 bp Feature: gene Location: 137740-139650 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 138073-138811 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 38073-1 3881 1 bp Feature: domain Description: HNHc Note: nucleases Location: 139366-139531 bp Feature: domain Description: HNHc Note: nucleases Location: 1 39366-1 39531 bp Feature: gene Location: 139838-139978 bp Feature: gene Location: 139991-140494 bp Feature: domain Description: ArdA Location: 140009-140480 bp Feature: domain Description: ArdA Location: 1 40009-1 40480 bp Feature: gene Location: 1285567-1286712 bp Feature: domain Description: FtsK Location: 1286227-1286692 bp Feature: domain Description: FtsK Location: 1 286227-1 286692 bp Feature: gene Location: 1287078-1287308 bp Feature: gene Location: 1287427-1289286 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1287736-1288477 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 287736-1 288477 bp Feature: domain Description: HNHc Note: nucleases Location: 1289032-1289170 bp Feature: domain Description: HNHc Note: nucleases Location: 1 289032-1 2891 70 bp Feature: gene Location: 1289380-1289619 bp Feature: gene Location: 1289697-1290371 bp Feature: domain Description: Zeta_toxin Location: 1289796-1290279 bp Feature: domain Description: Zeta_toxin Location: 1 289796-1 290279 bp Feature: gene Location: 1292049-1292192 bp Feature: gene Location: 1292285-1293469 bp Feature: domain Description: HTH_XRE Location: 1292315-1292459 bp Feature: domain Description: HTH_XRE Location: 1 29231 5-1 292459 bp Feature: domain Description: Rol_Rep_N Location: 1292492-1292756 bp Feature: domain Description: Rol_Rep_N Location: 1 292492-1 292756 bp Feature: domain Description: Rep_trans Location: 1292780-1293392 bp Feature: domain Description: Rep_trans Location: 1 292780-1 293392 bp Feature: gene Location: 1294349-1296259 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1294682-1295420 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 294682-1 295420 bp Feature: domain Description: HNHc Note: nucleases Location: 1295975-1296140 bp Feature: domain Description: HNHc Note: nucleases Location: 1 295975-1 2961 40 bp Feature: gene Location: 1296447-1296587 bp Feature: gene Location: 1296600-1297100 bp Feature: domain Description: ArdA Location: 1296618-1297089 bp Feature: domain Description: ArdA Location: 1 29661 8-1 297089 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RelB_DinJ (TIGR02384), FtsK_SpoIIIE (pfam01580), RVT-GII, HNHc (smart00507), FtsK (COG1674), Dcm (COG0270), HTH_XRE (smart00530), Rol_Rep_N (pfam18106), Rep_trans (pfam02486), ArdA (pfam07275)
Zeta_toxin (pfam06414)

Seq: WEFW01000003.1 Enterococcus faecium strain VRECG20, whole genome shotgun sequence (62619 bp)
Overview 1 RT 1: 41385-47253 bp Neighborhood of RT #1 [41385, 47327] Tra8 RVT-AbiP2 Transposase_mut HsdM Feature: gene Location: 41385-41546 bp Feature: gene Location: 41629-42582 bp Feature: domain Description: Tra8 Location: 41632-42559 bp Feature: domain Description: Tra8 Location: 41632 -42 559 bp Feature: gene Location: 42560-44035 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 42908-43373 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 42 908-43373 bp Feature: gene Location: 44214-45386 bp Feature: domain Description: Transposase_mut Location: 44217-45354 bp Feature: domain Description: Transposase_mut Location: 442 17-45354 bp Feature: gene Location: 45705-47327 bp Feature: domain Description: HsdM Location: 45726-47253 bp Feature: domain Description: HsdM Location: 4572 6-472 53 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tra8 (COG2826), RVT-AbiP2, Transposase_mut (pfam00872), HsdM (COG0286)