myRT

myRT report for GCA_009184255.1_ASM918425v1

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Seq: WEFZ01000001.1 Enterococcus faecium strain VRECG17, whole genome shotgun sequence (2834575 bp)
Overview 1 RT 1: 2707198-2712238 bp Neighborhood of RT #1 [2707198, 2712252] HTH_XRE Rol_Rep_N Rep_trans RVT-GII HNHc ArdA Feature: gene Location: 2707198-2707341 bp Feature: gene Location: 2707434-2708618 bp Feature: domain Description: HTH_XRE Location: 2707464-2707608 bp Feature: domain Description: HTH_XRE Location: 2707464-2707608 bp Feature: domain Description: Rol_Rep_N Location: 2707641-2707905 bp Feature: domain Description: Rol_Rep_N Location: 2707641 -2707905 bp Feature: domain Description: Rep_trans Location: 2707929-2708541 bp Feature: domain Description: Rep_trans Location: 2707929-2708541 bp Feature: gene Location: 2709498-2711408 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2709831-2710569 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2709831 -271 0569 bp Feature: domain Description: HNHc Note: nucleases Location: 2711124-2711289 bp Feature: domain Description: HNHc Note: nucleases Location: 271 1 1 24-271 1 289 bp Feature: gene Location: 2711596-2711736 bp Feature: gene Location: 2711749-2712252 bp Feature: domain Description: ArdA Location: 2711767-2712238 bp Feature: domain Description: ArdA Location: 271 1 767-271 2238 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), Rol_Rep_N (pfam18106), Rep_trans (pfam02486), RVT-GII, HNHc (smart00507), ArdA (pfam07275)

Seq: WEFZ01000002.1 Enterococcus faecium strain VRECG17, whole genome shotgun sequence (201735 bp)
Overview 1 RT 1: 19821-24905 bp Neighborhood of RT #1 [19821, 24910] VirB4 RVT-GII HNHc MazE Feature: gene Location: 19821-21515 bp Feature: domain Description: VirB4 Location: 20139-20823 bp Feature: domain Description: VirB4 Location: 2 0139-2 082 3 bp Feature: gene Location: 21783-22016 bp Feature: gene Location: 22203-24080 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22518-23256 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 2 518-2 32 56 bp Feature: domain Description: HNHc Note: nucleases Location: 23814-23967 bp Feature: domain Description: HNHc Note: nucleases Location: 2 3814-2 3967 bp Feature: gene Location: 24268-24588 bp Feature: gene Location: 24647-24910 bp Feature: domain Description: MazE Location: 24668-24905 bp Feature: domain Description: MazE Location: 2 4668-2 4905 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT VirB4 (COG3451), RVT-GII, HNHc (smart00507), MazE (COG2336)

Seq: WEFZ01000003.1 Enterococcus faecium strain VRECG17, whole genome shotgun sequence (57291 bp)
Overview 1 RT 1: 12900-18727 bp Neighborhood of RT #1 [12900, 18756] VirB4 RVT-GII HNHc CwlT_like Spr Feature: gene Location: 12900-14525 bp Feature: domain Description: VirB4 Location: 13236-13836 bp Feature: domain Description: VirB4 Location: 13 23 6-13 83 6 bp Feature: gene Location: 14793-15026 bp Feature: gene Location: 15213-17090 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15528-16266 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15528-16266 bp Feature: domain Description: HNHc Note: nucleases Location: 16824-16977 bp Feature: domain Description: HNHc Note: nucleases Location: 16824-16977 bp Feature: gene Location: 17278-17598 bp Feature: gene Location: 17620-18756 bp Feature: domain Description: CwlT_like Location: 17866-18343 bp Feature: domain Description: CwlT_like Location: 17866-183 43 bp Feature: domain Description: Spr Location: 18367-18727 bp Feature: domain Description: Spr Location: 183 67-18727 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT VirB4 (COG3451), RVT-GII, HNHc (smart00507), CwlT_like, Spr (COG0791)

Seq: WEFZ01000004.1 Enterococcus faecium strain VRECG17, whole genome shotgun sequence (56999 bp)
Overview 1 RT 1: 9788-15641 bp Neighborhood of RT #1 [9788, 15760] VirB4 RVT-GII HNHc Glucosaminidase Peptidase_M23 Feature: gene Location: 9788-11482 bp Feature: domain Description: VirB4 Location: 10106-10790 bp Feature: domain Description: VirB4 Location: 10106-10790 bp Feature: gene Location: 11750-11983 bp Feature: gene Location: 12170-14047 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12485-13223 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 124 85-13223 bp Feature: domain Description: HNHc Note: nucleases Location: 13781-13934 bp Feature: domain Description: HNHc Note: nucleases Location: 13781-13934 bp Feature: gene Location: 14235-14555 bp Feature: gene Location: 14555-15760 bp Feature: domain Description: Glucosaminidase Location: 14831-15227 bp Feature: domain Description: Glucosaminidase Location: 14 831-15227 bp Feature: domain Description: Peptidase_M23 Location: 15404-15641 bp Feature: domain Description: Peptidase_M23 Location: 154 04 -1564 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT VirB4 (COG3451), RVT-GII, HNHc (smart00507), Glucosaminidase (pfam01832), Peptidase_M23 (pfam01551)

Seq: WEFZ01000005.1 Enterococcus faecium strain VRECG17, whole genome shotgun sequence (44424 bp)
Overview 1 RT 1: 29432-34578 bp Neighborhood of RT #1 [29432, 34607] Tra8 RVT-AbiP2 HsdM Rve Feature: gene Location: 29432-29593 bp Feature: gene Location: 29676-30629 bp Feature: domain Description: Tra8 Location: 29679-30606 bp Feature: domain Description: Tra8 Location: 29679-30606 bp Feature: gene Location: 30607-32082 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 30955-31420 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 3095 5 -31420 bp Feature: gene Location: 32420-33898 bp Feature: domain Description: HsdM Location: 32441-33866 bp Feature: domain Description: HsdM Location: 32441-33866 bp Feature: gene Location: 33921-34607 bp Feature: domain Description: Rve Location: 33930-34578 bp Feature: domain Description: Rve Location: 33930-345 78 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tra8 (COG2826), RVT-AbiP2, HsdM (COG0286), Rve (COG3316)